Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P22
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical pr... 276 7e-75
Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical pr... 276 7e-75
AF067214-2|AAC17003.1| 344|Caenorhabditis elegans Hypothetical ... 28 4.1
U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated p... 28 5.4
U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated p... 28 5.4
U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated p... 28 5.4
U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated p... 28 5.4
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 28 5.4
U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin pr... 28 5.4
U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin pr... 28 5.4
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 28 5.4
U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein. 28 5.4
Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical pr... 27 9.5
U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily as... 27 9.5
>Z35663-6|CAD82917.1| 606|Caenorhabditis elegans Hypothetical
protein T04A8.7b protein.
Length = 606
Score = 276 bits (677), Expect = 7e-75
Identities = 126/188 (67%), Positives = 147/188 (78%)
Frame = +1
Query: 10 EVLRFLLSNLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVY 189
E LRFLLSN+RW+ EEY FDGFRFDGV+SM+YHS G+ + F G Y Y+GLN DT++LVY
Sbjct: 239 ETLRFLLSNVRWWVEEYGFDGFRFDGVSSMIYHSHGMNDDFCGGYPMYFGLNADTDSLVY 298
Query: 190 LMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIKLLKEERD 369
LMLAN+ H ITIAE+VSGMP CRPV+EGG GFDYRL MA+PDMWIK+LK D
Sbjct: 299 LMLANDFLHKKYPFMITIAEEVSGMPGICRPVEEGGQGFDYRLAMALPDMWIKILKHTSD 358
Query: 370 EDWKIGHIVHTLTNRRWMEGTIAYAESHDQALVGDKTIAFWLMDATMYSHMSTISEPSPV 549
EDWKI IV L NRR+ E +AYAESHDQALVGDKTIAFWLMD MY MST S +P+
Sbjct: 359 EDWKIDDIVFNLENRRYAEKHVAYAESHDQALVGDKTIAFWLMDKEMYDFMSTDSPLTPI 418
Query: 550 VERGLALH 573
++RGL+LH
Sbjct: 419 IDRGLSLH 426
>Z35663-5|CAA84727.1| 681|Caenorhabditis elegans Hypothetical
protein T04A8.7a protein.
Length = 681
Score = 276 bits (677), Expect = 7e-75
Identities = 126/188 (67%), Positives = 147/188 (78%)
Frame = +1
Query: 10 EVLRFLLSNLRWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVY 189
E LRFLLSN+RW+ EEY FDGFRFDGV+SM+YHS G+ + F G Y Y+GLN DT++LVY
Sbjct: 314 ETLRFLLSNVRWWVEEYGFDGFRFDGVSSMIYHSHGMNDDFCGGYPMYFGLNADTDSLVY 373
Query: 190 LMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIKLLKEERD 369
LMLAN+ H ITIAE+VSGMP CRPV+EGG GFDYRL MA+PDMWIK+LK D
Sbjct: 374 LMLANDFLHKKYPFMITIAEEVSGMPGICRPVEEGGQGFDYRLAMALPDMWIKILKHTSD 433
Query: 370 EDWKIGHIVHTLTNRRWMEGTIAYAESHDQALVGDKTIAFWLMDATMYSHMSTISEPSPV 549
EDWKI IV L NRR+ E +AYAESHDQALVGDKTIAFWLMD MY MST S +P+
Sbjct: 434 EDWKIDDIVFNLENRRYAEKHVAYAESHDQALVGDKTIAFWLMDKEMYDFMSTDSPLTPI 493
Query: 550 VERGLALH 573
++RGL+LH
Sbjct: 494 IDRGLSLH 501
>AF067214-2|AAC17003.1| 344|Caenorhabditis elegans Hypothetical
protein F56C3.4 protein.
Length = 344
Score = 28.3 bits (60), Expect = 4.1
Identities = 17/70 (24%), Positives = 28/70 (40%)
Frame = +1
Query: 40 RWYQEEYQFDGFRFDGVTSMLYHSRGIGEGFSGHYDEYYGLNVDTEALVYLMLANEITHN 219
R+ + F+ V +L G GF + N+ T +L +EI +N
Sbjct: 11 RYIGSRFSNKNFKITTVVQLLCKGPRRGSGFFPTWSSRKSTNLITMSLEKARQDSEINYN 70
Query: 220 IDGRAITIAE 249
+DG A+ E
Sbjct: 71 VDGAALAALE 80
>U50071-6|AAQ91911.1| 1004|Caenorhabditis elegans Uncoordinated
protein 44, isoform g protein.
Length = 1004
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U50071-5|AAA93443.1| 2039|Caenorhabditis elegans Uncoordinated
protein 44, isoform a protein.
Length = 2039
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U50071-4|AAM75382.1| 1841|Caenorhabditis elegans Uncoordinated
protein 44, isoform e protein.
Length = 1841
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U50071-3|AAA93444.1| 1867|Caenorhabditis elegans Uncoordinated
protein 44, isoform c protein.
Length = 1867
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U39847-3|AAB41826.1| 1815|Caenorhabditis elegans AO49 ankyrin
protein.
Length = 1815
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U39847-2|AAB41828.1| 1867|Caenorhabditis elegans AO66 ankyrin
protein.
Length = 1867
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>U21734-1|AAA85854.1| 1786|Caenorhabditis elegans UNC-44 protein.
Length = 1786
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/60 (28%), Positives = 23/60 (38%)
Frame = +3
Query: 264 AGVMSARERGRYGVRLPARHGHTRHVDKAAERGTRRGLEDRSHRTHSHQQEMDGGNHCVR 443
A + S G + + G V E G G + R+ T HQ G N+CVR
Sbjct: 713 AEINSKTNAGYTPLHVACHFGQLNMVKFLVENGADVGEKTRASYTPLHQAAQQGHNNCVR 772
>Z70213-9|CAA94177.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 169 DTEALVYLMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIK 348
+ + L L + EI + D A E+ + ++ + V+ + +DY +GMA+ IK
Sbjct: 1128 EEQKLKELRESGEIELDEDDLAAVAVEEDEAISSAAKAVETKLSDYDYLVGMAL----IK 1183
Query: 349 LLKEERDE 372
L +EE+++
Sbjct: 1184 LSEEEKNK 1191
>Z49069-5|CAA88867.1| 1520|Caenorhabditis elegans Hypothetical protein
K12D12.1 protein.
Length = 1520
Score = 27.1 bits (57), Expect = 9.5
Identities = 18/68 (26%), Positives = 36/68 (52%)
Frame = +1
Query: 169 DTEALVYLMLANEITHNIDGRAITIAEDVSGMPASCRPVKEGGTGFDYRLGMAIPDMWIK 348
+ + L L + EI + D A E+ + ++ + V+ + +DY +GMA+ IK
Sbjct: 1128 EEQKLKELRESGEIELDEDDLAAVAVEEDEAISSAAKAVETKLSDYDYLVGMAL----IK 1183
Query: 349 LLKEERDE 372
L +EE+++
Sbjct: 1184 LSEEEKNK 1191
>U40029-12|AAA81131.1| 785|Caenorhabditis elegans Temporarily
assigned gene nameprotein 151 protein.
Length = 785
Score = 27.1 bits (57), Expect = 9.5
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = +3
Query: 234 HYYCRGRIRNAGVMSARERGRYGVRLPARHGHTRH--VDKAAERGTRRGLEDR 386
H +G+ R G +++ RGR GV+ R H+ H + K A R + D+
Sbjct: 18 HKSWKGK-RTKGEITSENRGREGVKQLTRSAHSTHRTISKDARRNQLKMARDQ 69
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,851,371
Number of Sequences: 27780
Number of extensions: 300658
Number of successful extensions: 761
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 712
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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