Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P21
(508 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_01_0471 - 4147170-4149207,4150535-4150692 124 4e-29
04_04_1339 + 32760424-32760584,32762428-32764462 120 7e-28
02_05_0737 - 31328473-31330513,31331015-31331184 118 3e-27
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 76 1e-14
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 75 3e-14
01_04_0018 + 15128174-15128316,15128445-15128544,15129573-151297... 74 6e-14
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 68 4e-12
12_01_0812 - 7460448-7460507,7460595-7460672,7460772-7460981,746... 64 5e-11
05_02_0021 - 5674587-5674799,5674898-5675031,5675129-5675207,567... 44 5e-05
04_04_1337 + 32737051-32737202,32737314-32737809 38 0.004
12_01_0661 + 5596739-5597047,5597125-5597703 29 1.6
05_07_0297 + 29067322-29067396,29069043-29069378 29 1.6
04_03_0723 - 19016108-19016383 29 2.1
07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948 28 3.7
01_07_0074 - 40894916-40895754,40896322-40896691,40897239-408972... 28 3.7
09_02_0159 + 5105272-5106360,5107605-5107769 28 5.0
04_04_0659 + 27008867-27008963,27011209-27011280,27011833-270119... 28 5.0
12_01_0906 + 8799284-8799441,8800865-8801690,8801933-8802055,880... 27 6.5
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 124 bits (299), Expect = 4e-29
Identities = 63/133 (47%), Positives = 90/133 (67%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIA 189
DH ++ MIRDILMYMDRV++ N+ V++LGL ++RD +VR I L TLL+LI
Sbjct: 104 DHNKALQMIRDILMYMDRVFIPTNKKTPVFDLGLDLWRDTIVRSPKIHGRLLDTLLDLIH 163
Query: 190 RERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSA 369
RER GEV++R +R+ +MLM LG +VY++DFE+PFL S+ FYS ESQKF+ S
Sbjct: 164 RERTGEVINRSLMRSTTKMLMDLG---SSVYQDDFERPFLEVSASFYSGESQKFIECCSC 220
Query: 370 AVYINRVEARITQ 408
Y+ + + R+ +
Sbjct: 221 GEYLKKAQQRLDE 233
Score = 33.9 bits (74), Expect = 0.075
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = +2
Query: 407 KEAERARHYLDESTEPRIVAVLEHELIERHMKTI 508
+EAER Y+D T+ +I AV+ E++ HM+ +
Sbjct: 233 EEAERVSQYMDAKTDEKITAVVVKEMLANHMQRL 266
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 120 bits (289), Expect = 7e-28
Identities = 63/133 (47%), Positives = 87/133 (65%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIA 189
DH ++ MIRDILMYMDR ++ N+ V++LGL ++RD VVR I L TLLELI
Sbjct: 105 DHNKALQMIRDILMYMDRTFIATNKKTPVFDLGLELWRDIVVRTPKIHGRLLDTLLELIH 164
Query: 190 RERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSA 369
RER GE+++R +R+ +MLM LG +VY +DFEKPFL S+ FYS ESQ+F+
Sbjct: 165 RERMGEMINRGLMRSTTKMLMDLG---SSVYHDDFEKPFLEVSASFYSGESQQFIECCDC 221
Query: 370 AVYINRVEARITQ 408
Y+ + E R+ +
Sbjct: 222 GEYLKKAERRLAE 234
Score = 30.7 bits (66), Expect = 0.70
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = +2
Query: 407 KEAERARHYLDESTEPRIVAVLEHELIERHMKTI 508
+E ER Y+D T +I +V++ E++ HM+ +
Sbjct: 234 EELERVSQYMDAKTADKITSVVDTEMLANHMQRL 267
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 118 bits (284), Expect = 3e-27
Identities = 61/133 (45%), Positives = 86/133 (64%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIA 189
DH ++ MIRDILMYMDR YV Q+ V+ LGL ++RD ++ I L TLL+LI
Sbjct: 108 DHNKALQMIRDILMYMDRTYVPQSRRTPVHELGLNLWRDHIIHSPMIHSRLLDTLLDLIH 167
Query: 190 RERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSA 369
RER GE+++R +R+ +MLM LG AVY++DFEKPFL ++ FYS ESQ+F+
Sbjct: 168 RERMGEMINRGLMRSITKMLMDLG---AAVYQDDFEKPFLDVTASFYSGESQEFIECCDC 224
Query: 370 AVYINRVEARITQ 408
Y+ + E R+ +
Sbjct: 225 GNYLKKSERRLNE 237
Score = 39.1 bits (87), Expect = 0.002
Identities = 16/31 (51%), Positives = 21/31 (67%)
Frame = +2
Query: 407 KEAERARHYLDESTEPRIVAVLEHELIERHM 499
+E ER HYLD TE +I +V+E E+I HM
Sbjct: 237 EEMERVSHYLDSGTEAKITSVVEKEMIANHM 267
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 76.2 bits (179), Expect = 1e-14
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 1/134 (0%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQ-NEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELI 186
D M++IR I + +D YV+ + +V+++GL +FR + I LL LI
Sbjct: 186 DFCDQMLIIRGIALLLDVKYVKNVANICSVWDMGLKLFRKHLSLSPEIEHKTVTGLLRLI 245
Query: 187 ARERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENS 366
ER GE +DR + + +M LG+ Y E FEKPFL +SEFY+ E K+L ++
Sbjct: 246 ESERLGEAIDRTLLSHLLKMFTALGM-----YSESFEKPFLECTSEFYATEGVKYLQQSD 300
Query: 367 AAVYINRVEARITQ 408
Y+ VE R+ +
Sbjct: 301 IPDYLKHVETRLQE 314
Score = 27.1 bits (57), Expect = 8.7
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +2
Query: 407 KEAERARHYLDESTEPRIVAVLEHELIERHMKTI 508
+E ER YL+ +T ++ E +L++RH I
Sbjct: 314 EEHERCILYLEANTRKPLITATEKQLLQRHTSAI 347
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 74.9 bits (176), Expect = 3e-14
Identities = 35/128 (27%), Positives = 72/128 (56%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIA 189
+H+ + + Y+DR ++ + + + +GL FRD + Y I+ ++ ++ LI
Sbjct: 103 NHKIMVRWLSRFFFYLDRYFISRRSLIPLEQVGLTCFRDLI--YQEIKGQVKGAVIALID 160
Query: 190 RERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSA 369
+ER GE +DR ++N + + +G+ S YE DFE L ++++YS+++Q ++ E+S
Sbjct: 161 KEREGEQIDRALLKNVLGIFVEIGLGSMECYENDFEDFLLKDTTDYYSLKAQSWILEDSC 220
Query: 370 AVYINRVE 393
Y+ + E
Sbjct: 221 PDYMIKAE 228
>01_04_0018 +
15128174-15128316,15128445-15128544,15129573-15129758,
15129877-15129924,15130006-15130209,15130476-15130565,
15130667-15130747,15130827-15130889,15131794-15131832,
15131914-15132000,15132103-15132252,15132331-15132386,
15132493-15132775,15132989-15133132,15133233-15133451,
15133528-15133695,15133868-15133969
Length = 720
Score = 74.1 bits (174), Expect = 6e-14
Identities = 36/123 (29%), Positives = 72/123 (58%)
Frame = +1
Query: 13 HQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIAR 192
H+ + +R Y+DR YV + +D++ +LG FRD V + ++ + ++ +I
Sbjct: 105 HKLMVRWLRRFFDYLDRYYVTRRSLDSLKDLGWSSFRDLV--FDKLKSTVATIMIGMIDD 162
Query: 193 ERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSAA 372
ER G ++DR ++NA + + +G + Y +DFE+ FL+ ++++YS ++Q ++ ENS
Sbjct: 163 EREGNLIDRPLLKNALDIYVEIGDSQLNYYSDDFEQSFLNGTTDYYSKKAQTWILENSCP 222
Query: 373 VYI 381
Y+
Sbjct: 223 EYM 225
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 68.1 bits (159), Expect = 4e-12
Identities = 36/132 (27%), Positives = 71/132 (53%), Gaps = 4/132 (3%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRY--GCIRDHLRQT--LL 177
+H+ + + Y+DR ++ + + + +GL FRD V + G ++ + L
Sbjct: 103 NHKVMVRWLSRFFHYLDRYFISRRSLPQLSEVGLSCFRDLVYQEIKGKVKSAVISLTYFL 162
Query: 178 ELIARERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLG 357
E I +ER GE +DR ++N + + +G+ S YE DFE L ++++YS+++Q ++
Sbjct: 163 EQIDQEREGEQIDRALLKNVLDIFVEIGLTSMDYYENDFEDFLLKDTADYYSIKAQTWIL 222
Query: 358 ENSAAVYINRVE 393
E+S Y+ + E
Sbjct: 223 EDSCPDYMLKAE 234
Score = 31.5 bits (68), Expect = 0.40
Identities = 11/30 (36%), Positives = 21/30 (70%)
Frame = +2
Query: 407 KEAERARHYLDESTEPRIVAVLEHELIERH 496
+E ER HYL S+E +++ ++HEL+ ++
Sbjct: 239 REKERVAHYLHSSSEQKLLEKVQHELLTQY 268
>12_01_0812 -
7460448-7460507,7460595-7460672,7460772-7460981,
7461095-7461142,7461270-7461455,7461653-7461656,
7461766-7461893
Length = 237
Score = 64.5 bits (150), Expect = 5e-11
Identities = 34/121 (28%), Positives = 66/121 (54%)
Frame = +1
Query: 10 DHQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIA 189
+H+ ++ Y+DR Y+ + + + L L FRDQV Y ++D + +T++++I
Sbjct: 67 NHKKIVISETRFFFYLDRYYILRKSLVPLEQLNLCSFRDQV--YSELKDKITRTVVDMIN 124
Query: 190 RERRGEVVDRLAIRNACQMLMVLGINSRAVYEEDFEKPFLHQSSEFYSMESQKFLGENSA 369
ER G+V+DR +++ + + +G+ YE DFE F + +YS ++Q + E +
Sbjct: 125 DERDGKVIDRDLLKDVLDVYVQIGLGMEC-YEVDFENAFRESTRNYYSNKAQTSILECNG 183
Query: 370 A 372
A
Sbjct: 184 A 184
Score = 31.9 bits (69), Expect = 0.30
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +2
Query: 410 EAERARHYLDESTEPRIVAVLEHELIERHMKT 505
E ER HYL STEP+++ L+ EL+ ++T
Sbjct: 200 ELERVSHYLHSSTEPKLMQDLQSELMITPVET 231
>05_02_0021 -
5674587-5674799,5674898-5675031,5675129-5675207,
5675737-5675799,5676420-5676482,5676557-5676673,
5676756-5676803,5676918-5677103,5677948-5678047,
5678323-5678562,5678583-5678686
Length = 448
Score = 44.4 bits (100), Expect = 5e-05
Identities = 29/110 (26%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Frame = +1
Query: 13 HQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIAR 192
H+ + +R Y+DRV + + ++ ++G I FRD V + ++ L T++ +I
Sbjct: 172 HKLMVRWLRRFFDYLDRVSITWKSLHSLEHMGWIGFRDMV--FNKLKSTLTTTVIGMIND 229
Query: 193 ERRGEVVDRLAIRNACQMLMVLG---INSRAVYEEDFEKPFLHQSSEFYS 333
ER G ++DR ++N M G +NS Y E+ + + YS
Sbjct: 230 ERNGLLIDRALLKNVIHMCNEFGDSELNSYPEYILKAEECLQKEKEQVYS 279
>04_04_1337 + 32737051-32737202,32737314-32737809
Length = 215
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/82 (29%), Positives = 41/82 (50%)
Frame = +1
Query: 13 HQTSMVMIRDILMYMDRVYVQQNEVDNVYNLGLIIFRDQVVRYGCIRDHLRQTLLELIAR 192
H ++ +RD++MYM+R ++ +V LG+ ++RD VV C D + L+E + R
Sbjct: 108 HTEAVAAVRDMVMYMERTFIVTYRKVSVQELGVKLWRDGVV---CSGD-VMPRLVEAVRR 163
Query: 193 ERRGEVVDRLAIRNACQMLMVL 258
ER + +ML L
Sbjct: 164 ERAAAAEPGELMAGVAEMLTKL 185
>12_01_0661 + 5596739-5597047,5597125-5597703
Length = 295
Score = 29.5 bits (63), Expect = 1.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +2
Query: 266 THALYTKRTLKNLFYINRPSFTAW 337
TH LYTKR LKN + R +T W
Sbjct: 49 THLLYTKRQLKNKWDKLRNEYTIW 72
>05_07_0297 + 29067322-29067396,29069043-29069378
Length = 136
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = -3
Query: 290 SSSYTARELMPSTISIWQALRIASRSTTSPLRSRAINSNKVWRRW 156
+S +T L+ S+IS WQ L++A + + R + NK +W
Sbjct: 26 ASVFTGGWLLGSSISSWQTLKVAEQQIDALAREQEEYLNKFEAKW 70
>04_03_0723 - 19016108-19016383
Length = 91
Score = 29.1 bits (62), Expect = 2.1
Identities = 17/48 (35%), Positives = 20/48 (41%)
Frame = +1
Query: 364 SAAVYINRVEARITQGGGARAPLPRRVHRAADRGGPRTRTHRAAHEDY 507
SA + A GGG A + RR R R R RAA E+Y
Sbjct: 39 SAVTVVGHAHAHGGGGGGGDADVDRRAAMYISRVQERLRRERAASEEY 86
>07_03_0248 + 15798650-15799075,15799143-15799619,15799713-15800948
Length = 712
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +1
Query: 157 HLRQTLLELIARERRGEVVDRLAIRNACQMLMVLGINS 270
++ +L+ +E R +VD A+ N C+ L VLG +S
Sbjct: 583 YMATLVLDAAVQEARKHLVDATAMANKCKKLRVLGESS 620
>01_07_0074 -
40894916-40895754,40896322-40896691,40897239-40897291,
40897456-40897593,40897646-40897716,40898655-40898900,
40899205-40899386,40899494-40899697
Length = 700
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 326 NSDD*CRKGFSKSSSYTARELMPSTISIWQALRIASRS 213
N D R+ FS +Y R P ++WQ L + +S
Sbjct: 45 NGDAPPRRTFSFGQAYKTRHRQPQVFTVWQTLMLGYQS 82
>09_02_0159 + 5105272-5106360,5107605-5107769
Length = 417
Score = 27.9 bits (59), Expect = 5.0
Identities = 17/53 (32%), Positives = 22/53 (41%)
Frame = -1
Query: 250 LASGKRYGSRADPPLRLCARALSTPTRSGEDGLGYNHNGPPDL*I*STLGCKH 92
+ S GS PPL A + PT G+G + G P L T G K+
Sbjct: 262 VGSSSSAGSGISPPLPPSEVAAAPPTDEFTSGMGVDDGGVPSLTTPHTRGLKY 314
>04_04_0659 +
27008867-27008963,27011209-27011280,27011833-27011907,
27012071-27012181,27012609-27012713,27012997-27013049,
27013549-27013674,27013742-27013861
Length = 252
Score = 27.9 bits (59), Expect = 5.0
Identities = 13/32 (40%), Positives = 18/32 (56%)
Frame = +1
Query: 16 QTSMVMIRDILMYMDRVYVQQNEVDNVYNLGL 111
Q S + ++ RV +Q NEV VYNLG+
Sbjct: 218 QMSYTNLMQHIILSPRVSLQANEVSEVYNLGI 249
>12_01_0906 +
8799284-8799441,8800865-8801690,8801933-8802055,
8802144-8802210,8802611-8802714,8802798-8802900,
8803103-8803401,8804009-8804263,8805471-8805776,
8805866-8806194,8806829-8806916,8807027-8807164,
8807438-8807458
Length = 938
Score = 27.5 bits (58), Expect = 6.5
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 277 VYEEDFEKPFLHQSSEFYSMESQK 348
VY+E+FEK F+ Q S + +E+ K
Sbjct: 679 VYQENFEKCFVQQYSMIHRLETNK 702
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,470,002
Number of Sequences: 37544
Number of extensions: 311362
Number of successful extensions: 952
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1083123860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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