Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P21
         (508 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    24   0.79 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    22   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    22   3.2  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.2  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.3  

>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 24.2 bits (50), Expect = 0.79
 Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
 Frame = +2

Query: 392 RLASPKEAER--ARHYLDESTEPRIVAVLEHELIERHMK 502
           +L++ ++A++   RHYLD  +  +  ++ +H+L E  +K
Sbjct: 562 KLSTIEDADKNQCRHYLDAKSSVQNYSLAKHQLKEAFVK 600


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 364  SAAVYINRVEARITQGGG 417
            +A V  NRV ARIT  GG
Sbjct: 1304 AAQVPTNRVPARITSFGG 1321



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 220  ADPPLRLCARALST 179
            A PP+ L ARALS+
Sbjct: 1007 AGPPINLEARALSS 1020


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.2 bits (45), Expect = 3.2
 Identities = 11/18 (61%), Positives = 12/18 (66%)
 Frame = +1

Query: 364  SAAVYINRVEARITQGGG 417
            +A V  NRV ARIT  GG
Sbjct: 1300 AAQVPTNRVPARITSFGG 1317



 Score = 20.6 bits (41), Expect = 9.7
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -1

Query: 220  ADPPLRLCARALST 179
            A PP+ L ARALS+
Sbjct: 1003 AGPPINLEARALSS 1016


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.2
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -3

Query: 116 IINPRL*TLSTSFCCTYTLSMYMRIS 39
           I NPR     +   CT+T++ Y RI+
Sbjct: 56  IYNPRYPLPYSGSKCTWTITSYHRIN 81


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = -2

Query: 261 AEHH*HLASVTDREPIH 211
           A HH HL+S   R   H
Sbjct: 284 ASHHSHLSSALGRSACH 300


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,958
Number of Sequences: 438
Number of extensions: 3193
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)