Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P18
         (412 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC112928-1|AAI12929.1| 1519|Homo sapiens KIAA0284 protein protein.     31   2.0  
AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein.     31   2.0  
BC117215-1|AAI17216.1|  734|Homo sapiens ZNF235 protein protein.       30   2.6  
AF027513-1|AAD12728.1|  506|Homo sapiens zinc finger protein pro...    30   2.6  
AL035419-2|CAI19166.2|  178|Homo sapiens small adipocyte factor ...    29   4.5  

>BC112928-1|AAI12929.1| 1519|Homo sapiens KIAA0284 protein protein.
          Length = 1519

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 161 PSEIKISDIDG-AISITAELQGPGDGSGLVQTCDTNDEVKHGLY 289
           P+   I D +G A+     L  PGDG GL QT   +   + G+Y
Sbjct: 724 PASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVY 767


>AB006622-1|BAA22953.3| 1573|Homo sapiens KIAA0284 protein protein.
          Length = 1573

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +2

Query: 161 PSEIKISDIDG-AISITAELQGPGDGSGLVQTCDTNDEVKHGLY 289
           P+   I D +G A+     L  PGDG GL QT   +   + G+Y
Sbjct: 813 PASFFIGDQNGDAVLSRKPLAAPGDGEGLGQTAQPSPPARDGVY 856


>BC117215-1|AAI17216.1|  734|Homo sapiens ZNF235 protein protein.
          Length = 734

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 50  DKPESAGDTANLYSCNQN-QIHVHLHSSADKYNVDPC 157
           +KP   GD    +SC+ N   H  +H+    Y  D C
Sbjct: 424 EKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDEC 460


>AF027513-1|AAD12728.1|  506|Homo sapiens zinc finger protein
           protein.
          Length = 506

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
 Frame = +2

Query: 50  DKPESAGDTANLYSCNQN-QIHVHLHSSADKYNVDPC 157
           +KP   GD    +SC+ N   H  +H+    Y  D C
Sbjct: 428 EKPYKCGDCGKRFSCSSNLHTHQRVHTEEKPYKCDEC 464


>AL035419-2|CAI19166.2|  178|Homo sapiens small adipocyte factor 1
           (SMAF1) protein.
          Length = 178

 Score = 29.5 bits (63), Expect = 4.5
 Identities = 24/62 (38%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -2

Query: 327 CQ*GRHTSWLLVP*-SPCFTSSLVSHV*TRPLPSPGPCNSAVIDMAPSISLILISLGKHG 151
           CQ G+ T   +VP  +P   SS   HV     PSP P +      A S S    SLG HG
Sbjct: 81  CQGGKRTLATVVPPWNPQLISSSDRHVKASRGPSPSPASQMTSSPAGSRS----SLGGHG 136

Query: 150 ST 145
           S+
Sbjct: 137 SS 138


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,377,833
Number of Sequences: 237096
Number of extensions: 1616369
Number of successful extensions: 3806
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3654
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3806
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3030544982
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)