Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P17
(557 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein. 153 4e-37
U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein. 153 4e-37
BC131597-1|AAI31598.1| 1168|Homo sapiens sortilin-related VPS10 ... 118 1e-26
AY099453-1|AAM43812.1| 1159|Homo sapiens VPS10 domain receptor s... 118 1e-26
AY099452-1|AAM43811.1| 1179|Homo sapiens VPS10 domain receptor s... 118 1e-26
AL357333-1|CAI16407.1| 1168|Homo sapiens VPS10 domain receptor p... 118 1e-26
AL356308-1|CAI14367.1| 1168|Homo sapiens VPS10 domain receptor p... 118 1e-26
AL356255-1|CAH73442.1| 1168|Homo sapiens VPS10 domain receptor p... 118 1e-26
AL160010-1|CAH70582.1| 1168|Homo sapiens VPS10 domain receptor p... 118 1e-26
AL133395-4|CAI40755.1| 714|Homo sapiens VPS10 domain receptor p... 118 1e-26
AL133395-2|CAI40753.1| 1168|Homo sapiens VPS10 domain receptor p... 118 1e-26
AF284756-1|AAL56667.1| 1168|Homo sapiens VPS10 domain receptor S... 118 1e-26
AB209142-1|BAD92379.1| 1182|Homo sapiens VPS10 domain receptor p... 118 1e-26
BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10 ... 115 1e-25
AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor p... 115 1e-25
AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein. 115 1e-25
AB037750-1|BAA92567.1| 907|Homo sapiens KIAA1329 protein protein. 112 7e-25
X98248-1|CAA66904.2| 831|Homo sapiens sortilin protein. 80 6e-15
BC023542-1|AAH23542.1| 831|Homo sapiens sortilin 1 protein. 80 6e-15
AL390252-11|CAI13180.1| 831|Homo sapiens sortilin 1 protein. 80 6e-15
BC126171-1|AAI26172.1| 1119|Homo sapiens leucine-rich repeats an... 32 1.2
BC126169-1|AAI26170.1| 1119|Homo sapiens leucine-rich repeats an... 32 1.2
AY505340-1|AAR98629.1| 1119|Homo sapiens leucine-rich and immuno... 32 1.2
AY358295-1|AAQ88662.1| 1059|Homo sapiens SAPS287 protein. 32 1.2
AY358288-1|AAQ88655.1| 1119|Homo sapiens SAPS287 protein. 32 1.2
AK074921-1|BAC11295.1| 697|Homo sapiens protein ( Homo sapiens ... 32 1.2
X04299-1|CAA27842.1| 375|Homo sapiens protein ( Human mRNA for ... 30 6.3
BC067421-1|AAH67421.1| 375|Homo sapiens alcohol dehydrogenase 1... 30 6.3
BC067419-1|AAH67419.1| 375|Homo sapiens class I alcohol dehydro... 30 6.3
BC066227-1|AAH66227.1| 375|Homo sapiens alcohol dehydrogenase 1... 30 6.3
BC062476-1|AAH62476.1| 375|Homo sapiens alcohol dehydrogenase 1... 30 6.3
>Y08110-1|CAA69325.1| 2214|Homo sapiens mosaic protein LR11 protein.
Length = 2214
Score = 153 bits (371), Expect = 4e-37
Identities = 77/188 (40%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDE-DQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVL 186
L EPG+K+T FT+FGS K+ W+I+ ++ + CT++DYK W C+L
Sbjct: 587 LTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNE-CLL 645
Query: 187 GSKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFM----LSGEECTRNKSV 354
G K +F+RR H C+NG D+ RPV C CTR DYECDFGF LS E C +
Sbjct: 646 GHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSLEVCVPDPEF 705
Query: 355 KYDPFAVPSDCRPGQYYLQTKGYRKIDGNMCTVSD-HSDYAPERKSCPLEEPTEFILVAL 531
++ P C G Y +T+GYRKI G+ C+ D + E CPL E EFIL A+
Sbjct: 706 SGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAV 765
Query: 532 NTKIARID 555
I R D
Sbjct: 766 RKSIYRYD 773
>U60975-1|AAC50891.2| 2214|Homo sapiens gp250 precursor protein.
Length = 2214
Score = 153 bits (371), Expect = 4e-37
Identities = 77/188 (40%), Positives = 102/188 (54%), Gaps = 6/188 (3%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDE-DQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVL 186
L EPG+K+T FT+FGS K+ W+I+ ++ + CT++DYK W C+L
Sbjct: 587 LTEPGEKSTVFTIFGSNKENVHSWLILQVNATDALGVPCTENDYKLWSPSDERGNE-CLL 645
Query: 187 GSKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFM----LSGEECTRNKSV 354
G K +F+RR H C+NG D+ RPV C CTR DYECDFGF LS E C +
Sbjct: 646 GHKTVFKRRTPHATCFNGEDFDRPVVVSNCSCTREDYECDFGFKMSEDLSLEVCVPDPEF 705
Query: 355 KYDPFAVPSDCRPGQYYLQTKGYRKIDGNMCTVSD-HSDYAPERKSCPLEEPTEFILVAL 531
++ P C G Y +T+GYRKI G+ C+ D + E CPL E EFIL A+
Sbjct: 706 SGKSYSPPVPCPVGSTYRRTRGYRKISGDTCSGGDVEARLEGELVPCPLAEENEFILYAV 765
Query: 532 NTKIARID 555
I R D
Sbjct: 766 RKSIYRYD 773
>BC131597-1|AAI31598.1| 1168|Homo sapiens sortilin-related VPS10
domain containing receptor 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AY099453-1|AAM43812.1| 1159|Homo sapiens VPS10 domain receptor
sorCS1a protein.
Length = 1159
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AY099452-1|AAM43811.1| 1179|Homo sapiens VPS10 domain receptor
sorCS1c protein.
Length = 1179
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AL357333-1|CAI16407.1| 1168|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AL356308-1|CAI14367.1| 1168|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AL356255-1|CAH73442.1| 1168|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AL160010-1|CAH70582.1| 1168|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AL133395-4|CAI40755.1| 714|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 714
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 171 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 228
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 229 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 285
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 286 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 344
>AL133395-2|CAI40753.1| 1168|Homo sapiens VPS10 domain receptor
protein SORCS 1 protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AF284756-1|AAL56667.1| 1168|Homo sapiens VPS10 domain receptor SorCS
protein.
Length = 1168
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 636 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 693
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 694 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 750
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 751 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 809
>AB209142-1|BAD92379.1| 1182|Homo sapiens VPS10 domain receptor
protein SORCS 1 variant protein.
Length = 1182
Score = 118 bits (285), Expect = 1e-26
Identities = 55/179 (30%), Positives = 93/179 (51%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L EPG++T T+FG +W ++ +D K+ F R C ++DY+ W C++G
Sbjct: 650 LGEPGEETLIMTVFGHFSHRSEWQLVKVDYKSIFDRRCAEEDYRPW--QLHSQGEACIMG 707
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGF-MLSGEECTRNKSVKYDP 366
+K I+++R + C G Y ++ E C CT D++CD+G+ S +C + ++P
Sbjct: 708 AKRIYKKRKSERKCMQG-KYAGAMESEPCVCTEADFDCDYGYERHSNGQCL--PAFWFNP 764
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
++ DC GQ YL + GYRK+ N CT Y + + CP + P +V + K+
Sbjct: 765 SSLSKDCSLGQSYLNSTGYRKVVSNNCTDGVREQYTAKPQKCPGKAPRGLRIVTADGKL 823
>BC117417-1|AAI17418.1| 1222|Homo sapiens sortilin-related VPS10
domain containing receptor 3 protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL596118-1|CAH70023.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL445492-1|CAH70477.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL365449-1|CAH70813.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL358949-1|CAH72221.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL353900-2|CAI64579.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AL161646-1|CAH70335.1| 1222|Homo sapiens VPS10 domain receptor
protein SORCS 3 (SORCS3) protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AB028982-1|BAA83011.2| 1222|Homo sapiens KIAA1059 protein protein.
Length = 1222
Score = 115 bits (277), Expect = 1e-25
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 1/179 (0%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L E G +T T+FG +W ++ +D K+ F+R+CT++DY+ W CV+G
Sbjct: 659 LVEAGMETHIMTVFGHFSLRSEWQLVKVDYKSIFSRHCTKEDYQTWHLLNQGEP--CVMG 716
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE-ECTRNKSVKYDP 366
+ IF++R C G D+ V E C C D+ECD+G+ GE +C + Y+P
Sbjct: 717 ERKIFKKRKPGAQCALGRDHSGSVVSEPCVCANWDFECDYGYERHGESQCV--PAFWYNP 774
Query: 367 FAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEPTEFILVALNTKI 543
+ DC GQ YL + GYR+I N CT Y + + CP + P +V + ++
Sbjct: 775 ASPSKDCSLGQSYLNSTGYRRIVSNNCTDGLREKYTAKAQMCPGKAPRGLHVVTTDGRL 833
>AB037750-1|BAA92567.1| 907|Homo sapiens KIAA1329 protein protein.
Length = 907
Score = 112 bits (270), Expect = 7e-25
Identities = 53/170 (31%), Positives = 85/170 (50%), Gaps = 4/170 (2%)
Frame = +1
Query: 10 LAEPGDKTTTFTMFGSAKDEDQWIIINMDLKNTFARNCTQDDYKFWXXXXXXXXXXCVLG 189
L+EPGD+T T+FG W ++ +D + +F+R C ++DY W C++G
Sbjct: 360 LSEPGDETLVMTVFGHISFRSDWELVKVDFRPSFSRQCGEEDYSSW-ELSNLQGDRCIMG 418
Query: 190 SKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLS-GEECTRNK---SVK 357
+ F++R + + C G + + VCEC D+ CD+GF S E + NK +
Sbjct: 419 QQRSFRKRKSTSWCIKGRSFTSALTSRVCECRDSDFLCDYGFERSPSSESSTNKCSANFW 478
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKIDGNMCTVSDHSDYAPERKSCPLEEP 507
++P + P DC GQ Y + GYRK+ N+C + + CPL P
Sbjct: 479 FNPLSPPDDCALGQTYTSSLGYRKVVSNVCEGGVDMQQSQVQLQCPLTPP 528
>X98248-1|CAA66904.2| 831|Homo sapiens sortilin protein.
Length = 831
Score = 79.8 bits (188), Expect = 6e-15
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Frame = +1
Query: 7 GLA-EPGDKTTTFTMFGSAKD--EDQWIIINMDLKNTFARNCTQDDYKFWXXXXXX---X 168
GLA EPG ++ +++G + QW+ +D K+ RNC + DY W
Sbjct: 571 GLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDY 630
Query: 169 XXXCVLGSKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFML--SGEECTR 342
C+LG K F R + C NG DY + +C C+ D+ CDFG+ + +C
Sbjct: 631 EDGCILGYKEQFLRLRKSSMCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVE 690
Query: 343 NKSVKYDPFAVPSDCRPG-QYYLQTKGYRKIDGNMC 447
+K C G + +L T GYRKI G+ C
Sbjct: 691 QPELKGHDLEF---CLYGREEHLTTNGYRKIPGDKC 723
>BC023542-1|AAH23542.1| 831|Homo sapiens sortilin 1 protein.
Length = 831
Score = 79.8 bits (188), Expect = 6e-15
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Frame = +1
Query: 7 GLA-EPGDKTTTFTMFGSAKD--EDQWIIINMDLKNTFARNCTQDDYKFWXXXXXX---X 168
GLA EPG ++ +++G + QW+ +D K+ RNC + DY W
Sbjct: 571 GLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDY 630
Query: 169 XXXCVLGSKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFML--SGEECTR 342
C+LG K F R + C NG DY + +C C+ D+ CDFG+ + +C
Sbjct: 631 EDGCILGYKEQFLRLRKSSVCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVE 690
Query: 343 NKSVKYDPFAVPSDCRPG-QYYLQTKGYRKIDGNMC 447
+K C G + +L T GYRKI G+ C
Sbjct: 691 QPELKGHDLEF---CLYGREEHLTTNGYRKIPGDKC 723
>AL390252-11|CAI13180.1| 831|Homo sapiens sortilin 1 protein.
Length = 831
Score = 79.8 bits (188), Expect = 6e-15
Identities = 48/156 (30%), Positives = 71/156 (45%), Gaps = 9/156 (5%)
Frame = +1
Query: 7 GLA-EPGDKTTTFTMFGSAKD--EDQWIIINMDLKNTFARNCTQDDYKFWXXXXXX---X 168
GLA EPG ++ +++G + QW+ +D K+ RNC + DY W
Sbjct: 571 GLASEPGARSMNISIWGFTESFLTSQWVSYTIDFKDILERNCEEKDYTIWLAHSTDPEDY 630
Query: 169 XXXCVLGSKNIFQRRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFML--SGEECTR 342
C+LG K F R + C NG DY + +C C+ D+ CDFG+ + +C
Sbjct: 631 EDGCILGYKEQFLRLRKSSVCQNGRDYVVTKQPSICLCSLEDFLCDFGYYRPENDSKCVE 690
Query: 343 NKSVKYDPFAVPSDCRPG-QYYLQTKGYRKIDGNMC 447
+K C G + +L T GYRKI G+ C
Sbjct: 691 QPELKGHDLEF---CLYGREEHLTTNGYRKIPGDKC 723
>BC126171-1|AAI26172.1| 1119|Homo sapiens leucine-rich repeats and
immunoglobulin-like domains 3 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 1053 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 1105
>BC126169-1|AAI26170.1| 1119|Homo sapiens leucine-rich repeats and
immunoglobulin-like domains 3 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 1053 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 1105
>AY505340-1|AAR98629.1| 1119|Homo sapiens leucine-rich and
immunoglobulin-like domains 3 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 1053 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 1105
>AY358295-1|AAQ88662.1| 1059|Homo sapiens SAPS287 protein.
Length = 1059
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 993 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 1045
>AY358288-1|AAQ88655.1| 1119|Homo sapiens SAPS287 protein.
Length = 1119
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 1053 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 1105
>AK074921-1|BAC11295.1| 697|Homo sapiens protein ( Homo sapiens
cDNA FLJ90440 fis, clone NT2RP3000921, weakly similar to
TUMOR SUPPRESSOR PROTEIN DCC PRECURSOR. ).
Length = 697
Score = 32.3 bits (70), Expect = 1.2
Identities = 15/53 (28%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Frame = +1
Query: 358 YDPFAVPSDCRPGQYYLQTKGYRKID-GNMCTVSDHSDYAPERKSCPLEEPTE 513
Y F PSDC+P +YL+ +D G+ + +D+ E C ++ E
Sbjct: 631 YSSFGQPSDCQPRAFYLKAHSSPDLDSGSEEDGKERTDFQEENHICTFKQTLE 683
>X04299-1|CAA27842.1| 375|Homo sapiens protein ( Human mRNA for
liver alcohol dehydrogenase (EC 1.1.1.1) gamma 2
subunit from ADH3 locus. ).
Length = 375
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 208 RRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE 330
+ L T+C N DY++P+++ + E T D DF F + G+
Sbjct: 234 KELGATECINPQDYKKPIQEVLKEMT--DGGVDFSFEVIGQ 272
>BC067421-1|AAH67421.1| 375|Homo sapiens alcohol dehydrogenase 1C
(class I), gamma polypeptide protein.
Length = 375
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 208 RRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE 330
+ L T+C N DY++P+++ + E T D DF F + G+
Sbjct: 234 KELGATECINPQDYKKPIQEVLKEMT--DGGVDFSFEVIGQ 272
>BC067419-1|AAH67419.1| 375|Homo sapiens class I alcohol
dehydrogenase, gamma subunit protein.
Length = 375
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 208 RRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE 330
+ L T+C N DY++P+++ + E T D DF F + G+
Sbjct: 234 KELGATECINPQDYKKPIQEVLKEMT--DGGVDFSFEVIGQ 272
>BC066227-1|AAH66227.1| 375|Homo sapiens alcohol dehydrogenase 1C
(class I), gamma polypeptide protein.
Length = 375
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 208 RRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE 330
+ L T+C N DY++P+++ + E T D DF F + G+
Sbjct: 234 KELGATECINPQDYKKPIQEVLKEMT--DGGVDFSFEVIGQ 272
>BC062476-1|AAH62476.1| 375|Homo sapiens alcohol dehydrogenase 1C
(class I), gamma polypeptide protein.
Length = 375
Score = 29.9 bits (64), Expect = 6.3
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 208 RRLAHTDCYNGVDYQRPVKKEVCECTRRDYECDFGFMLSGE 330
+ L T+C N DY++P+++ + E T D DF F + G+
Sbjct: 234 KELGATECINPQDYKKPIQEVLKEMT--DGGVDFSFEVIGQ 272
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,201,957
Number of Sequences: 237096
Number of extensions: 1710899
Number of successful extensions: 7699
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 7435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7634
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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