Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P17
         (557 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    31   0.010
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             24   1.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.1  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.1  
DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated...    21   6.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   6.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   6.4  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 30.7 bits (66), Expect = 0.010
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = -2

Query: 511  QSAPRGDKIFVLARSLSDQILCTYFRRFSYNLLFEGSIDLDGSPTERQMDR 359
            Q A     I+   +++ DQI+  Y++    + +  G+I LDG P    +DR
Sbjct: 929  QHAGGWQSIYAQPQTVQDQIVSEYYQNKPISEVIGGAISLDGKPLGFPLDR 979


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 17/66 (25%), Positives = 22/66 (33%)
 Frame = +2

Query: 275 ANVHEGITNAISGLCYPVKNAHEISQSNTIHLPFRRTAVQVNTTFKQKVIGKSTEICAQY 454
           A  H  +  A S  C PV    E   S  +H P   T++    T        +T   A  
Sbjct: 65  AQAHHRLYPAFSSSCDPVPGNLEQIGSRPLHPPASSTSLPATITTTTTTTTTTTATAAAT 124

Query: 455 LITQTT 472
             T  T
Sbjct: 125 ATTTAT 130


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 508 SAPRGDKIFVLARSLSDQILCTY 440
           S PRG  I   + + S+Q LC Y
Sbjct: 717 SGPRGVAIVSASTARSEQFLCRY 739


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 1   ARGLAEPGDKTTTFTMFGSAKDEDQ 75
           A  L  PG +  T T  GS +DED+
Sbjct: 416 AAALVAPGMEEPTNTASGSNEDEDE 440


>DQ667194-1|ABG75746.1|  391|Apis mellifera cys-loop ligand-gated
           ion channel subunit protein.
          Length = 391

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -3

Query: 435 VDFPITFCLKVVLTW 391
           + FPI F L ++L W
Sbjct: 368 IGFPILFMLFIILYW 382


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 531  QCDENELSRLLEGTRFSFW 475
            +CD + L +L  G R S W
Sbjct: 1888 ECDIDSLKKLKLGLRSSLW 1906


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 6.4
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = -3

Query: 531  QCDENELSRLLEGTRFSFW 475
            +CD + L +L  G R S W
Sbjct: 1884 ECDIDSLKKLKLGLRSSLW 1902


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,193
Number of Sequences: 438
Number of extensions: 3661
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16072521
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)