Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P14
         (531 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    22   3.4  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    22   3.4  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    22   3.4  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    22   3.4  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    22   3.4  
DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex det...    21   5.9  
DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex det...    21   5.9  
DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex det...    21   5.9  
DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex det...    21   5.9  
DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    21   5.9  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   5.9  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   5.9  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    21   7.9  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    21   7.9  

>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M S     + +   R I    P PR +PP
Sbjct: 119 YYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M S     + +   R I    P PR +PP
Sbjct: 119 YYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M S     + +   R I    P PR +PP
Sbjct: 119 YYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M S     + +   R I    P PR +PP
Sbjct: 119 YYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M S     + +   R I    P PR +PP
Sbjct: 119 YYGNFPPRPMGSWISIQEQIPRFRHIGPSTPFPRFIPP 156


>DQ325094-1|ABD14108.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325093-1|ABD14107.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325092-1|ABD14106.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ325091-1|ABD14105.1|  175|Apis mellifera complementary sex
           determiner protein.
          Length = 175

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 120 YYGNFPPRPMGPFVSMQEQIPRFRYIGPPTPFPRFIPP 157


>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +3

Query: 381 IFGTGSEWWLLHMTH 425
           ++   +EW ++HM+H
Sbjct: 201 MYNNNTEWEIVHMSH 215


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 497 IYKQLNPRCLHCRYQ 453
           I K+   RC +CRYQ
Sbjct: 154 IDKRQRNRCQYCRYQ 168


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -2

Query: 497 IYKQLNPRCLHCRYQ 453
           I K+   RC +CRYQ
Sbjct: 154 IDKRQRNRCQYCRYQ 168


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 134 YYGNFPPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 171


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 10/38 (26%), Positives = 14/38 (36%)
 Frame = -1

Query: 225 YFSKLPTSRMLSSAGCVQSMVNLRLIFLLAPLPRILPP 112
           Y+   P   M       + +   R I    P PR +PP
Sbjct: 134 YYGNFPPRPMGPWISMQEQIPRFRYIGPSTPFPRFIPP 171


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,236
Number of Sequences: 438
Number of extensions: 2803
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14968302
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)