Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P13
         (318 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC006807-1|AAH06807.1|  179|Homo sapiens peptidyl-tRNA hydrolase...    31   0.98 
AL137322-1|CAB70696.1|  176|Homo sapiens hypothetical protein pr...    31   0.98 
AF151905-1|AAD34142.1|  179|Homo sapiens CGI-147 protein protein.      31   0.98 
AL356275-1|CAI40193.1|  144|Homo sapiens chromosome 1 open readi...    27   9.1  
AL035209-1|CAI18803.1|  144|Homo sapiens chromosome 1 open readi...    27   9.1  

>BC006807-1|AAH06807.1|  179|Homo sapiens peptidyl-tRNA hydrolase 2
           protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 256 KGKIAGQCGHAAVGAFEK 309
           KGK+A QC HAAV A+++
Sbjct: 79  KGKVAAQCSHAAVSAYKQ 96


>AL137322-1|CAB70696.1|  176|Homo sapiens hypothetical protein
           protein.
          Length = 176

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 256 KGKIAGQCGHAAVGAFEK 309
           KGK+A QC HAAV A+++
Sbjct: 76  KGKVAAQCSHAAVSAYKQ 93


>AF151905-1|AAD34142.1|  179|Homo sapiens CGI-147 protein protein.
          Length = 179

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 256 KGKIAGQCGHAAVGAFEK 309
           KGK+A QC HAAV A+++
Sbjct: 79  KGKVAAQCSHAAVSAYKQ 96


>AL356275-1|CAI40193.1|  144|Homo sapiens chromosome 1 open reading
           frame 132 protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 234 RTDLNMSQRENSWPM--WSCCC 293
           R    ++++ N WP   WSCCC
Sbjct: 40  REKQQVTEQRNGWPSQSWSCCC 61


>AL035209-1|CAI18803.1|  144|Homo sapiens chromosome 1 open reading
           frame 132 protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 9/22 (40%), Positives = 13/22 (59%), Gaps = 2/22 (9%)
 Frame = +3

Query: 234 RTDLNMSQRENSWPM--WSCCC 293
           R    ++++ N WP   WSCCC
Sbjct: 40  REKQQVTEQRNGWPSQSWSCCC 61


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,696,522
Number of Sequences: 237096
Number of extensions: 820212
Number of successful extensions: 1363
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1355
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1511340428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)