Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P12
(448 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_01_0292 - 2387653-2387711,2388061-2388684,2388814-2389104,238... 55 2e-08
12_02_1282 + 27528159-27529148,27529549-27529614 32 0.18
12_01_0409 - 3230853-3230918,3231372-3231994,3232454-3232847,323... 32 0.18
11_01_0403 + 3059650-3059709,3059807-3060200,3060275-3060930,306... 32 0.18
10_08_0597 + 19089616-19089675,19089789-19090182,19090451-190910... 32 0.18
05_01_0047 - 323097-323162,323287-323900,324233-324626,324718-32... 32 0.18
03_06_0585 - 34912159-34912224,34912634-34913247,34913350-349137... 32 0.18
03_05_0926 + 28871800-28871859,28871943-28872336,28872586-288731... 32 0.18
01_07_0285 - 42476767-42476832,42476990-42477603,42477821-424782... 32 0.18
05_04_0450 - 21356877-21356942,21357482-21358095,21358173-213585... 31 0.32
01_06_1455 + 37504175-37504231,37504357-37504750,37504865-375054... 31 0.32
08_01_0254 + 2078380-2078392,2078487-2078578,2079579-2079698,207... 29 1.3
04_04_1515 + 34117383-34117732,34117833-34117918,34118227-341182... 29 1.3
07_01_0232 + 1701612-1701753,1701848-1703280 27 5.2
07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569 27 5.2
02_05_0417 - 28796121-28796743,28796829-28796925,28797010-287970... 27 6.9
11_01_0484 - 3720376-3720671,3721209-3721767,3722209-3722640,372... 27 9.1
10_05_0058 + 8662996-8663826 27 9.1
07_03_0394 - 17633753-17636788 27 9.1
05_04_0022 - 17217626-17217643,17217740-17217856,17217987-172181... 27 9.1
03_06_0353 - 33317015-33318235,33318567-33318824,33319587-333199... 27 9.1
>01_01_0292 -
2387653-2387711,2388061-2388684,2388814-2389104,
2389338-2389390,2390496-2390968,2391090-2391432,
2391793-2391911,2392081-2392512,2392657-2392747,
2392833-2392942,2393681-2393875,2394581-2394622,
2395144-2395268,2395856-2395926,2396047-2396147
Length = 1042
Score = 55.2 bits (127), Expect = 2e-08
Identities = 33/103 (32%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIVN-IE 317
P+VIDNG+ R+GW+ EP + F+N++ RPR + + VT ++ +
Sbjct: 21 PIVIDNGASTFRIGWAGEAEPRVAFRNIVQRPR----HRSSGETVTVVGDTDPALMKYFD 76
Query: 318 AVRFQLKTQFDKNVVTHFEAQEQVCDYLFSHLSIDAEGNVPHP 446
R +++ FD +VV FE E + D+ F L +E V HP
Sbjct: 77 CTRSAIRSPFDDDVVYQFEYMEYILDFGFDRLGATSE--VGHP 117
>12_02_1282 + 27528159-27529148,27529549-27529614
Length = 351
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>12_01_0409 -
3230853-3230918,3231372-3231994,3232454-3232847,
3233000-3233059
Length = 380
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>11_01_0403 +
3059650-3059709,3059807-3060200,3060275-3060930,
3060979-3061044
Length = 391
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>10_08_0597 +
19089616-19089675,19089789-19090182,19090451-19091064,
19091160-19091225
Length = 377
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>05_01_0047 -
323097-323162,323287-323900,324233-324626,324718-324777
Length = 377
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>03_06_0585 -
34912159-34912224,34912634-34913247,34913350-34913734,
34913824-34913883
Length = 374
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>03_05_0926 +
28871800-28871859,28871943-28872336,28872586-28873199,
28873281-28873346
Length = 377
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>01_07_0285 -
42476767-42476832,42476990-42477603,42477821-42478214,
42478301-42478360
Length = 377
Score = 32.3 bits (70), Expect = 0.18
Identities = 12/33 (36%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
PLV DNG+ + G++ + P +F +++ RPR
Sbjct: 9 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 41
>05_04_0450 -
21356877-21356942,21357482-21358095,21358173-21358566,
21358648-21358704
Length = 376
Score = 31.5 bits (68), Expect = 0.32
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
P+V DNG+ + G++ + P +F +++ RPR
Sbjct: 8 PIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 40
>01_06_1455 +
37504175-37504231,37504357-37504750,37504865-37505478,
37506021-37506086
Length = 376
Score = 31.5 bits (68), Expect = 0.32
Identities = 11/33 (33%), Positives = 21/33 (63%)
Frame = +3
Query: 141 PLVIDNGSYQCRVGWSICEEPNLIFKNLIARPR 239
P+V DNG+ + G++ + P +F +++ RPR
Sbjct: 8 PIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPR 40
>08_01_0254 +
2078380-2078392,2078487-2078578,2079579-2079698,
2079924-2080097,2080184-2080257,2080847-2080927,
2081306-2081366,2081437-2081486,2082278-2082332,
2082599-2082676,2082757-2082810,2083703-2083756,
2083846-2083906,2084229-2084280,2085118-2085184,
2085393-2085452,2085546-2085608,2085752-2085814,
2086337-2086401,2086620-2086688,2086742-2086847
Length = 503
Score = 29.5 bits (63), Expect = 1.3
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 144 LVIDNGSYQCRVGWSICEEPNLIFKNL 224
+VID GSY C+ G++ + P +F +L
Sbjct: 10 IVIDVGSYSCKAGYAGDDTPKAVFPSL 36
>04_04_1515 +
34117383-34117732,34117833-34117918,34118227-34118297,
34118457-34118524,34118692-34118753,34119010-34119107,
34119545-34119626,34119935-34120077,34120233-34120381,
34120461-34120594,34120714-34120832,34120926-34121014,
34121398-34121515
Length = 522
Score = 29.5 bits (63), Expect = 1.3
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 9/47 (19%)
Frame = +3
Query: 93 PDIVYEYEPTLKFGHI---------PLVIDNGSYQCRVGWSICEEPN 206
P + Y+ P L F H+ +++D GS C+ GWS P+
Sbjct: 116 PGLYYDSSPQLSFKHVYTRRAVVPGSIIVDGGSGYCKYGWSKYAAPS 162
>07_01_0232 + 1701612-1701753,1701848-1703280
Length = 524
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 373 SKCVTTFL-SNCVFN*NLTASMFTISFPI*IGGVTGGSASFLHLSFLGRAIKFLNIKFGS 197
S TTFL S+ ASM I G G SA+ L LGR + + + FG+
Sbjct: 96 SGLATTFLASHVTARRGRRASMLVAGAAIAAGATVGASAAGLATVILGRVLLGVGVGFGN 155
Query: 196 SHI 188
+
Sbjct: 156 QAV 158
>07_01_0228 + 1669033-1669171,1669268-1669655,1669807-1670569
Length = 429
Score = 27.5 bits (58), Expect = 5.2
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
Frame = -1
Query: 373 SKCVTTFL-SNCVFN*NLTASMFTISFPI*IGGVTGGSASFLHLSFLGRAIKFLNIKFGS 197
S TTFL S+ ASM I G G SA+ L LGR + + + FG+
Sbjct: 95 SGLATTFLASHVTARRGRRASMLVAGAAIAAGATVGASAAGLATVILGRVLLGVGVGFGN 154
Query: 196 SHI 188
+
Sbjct: 155 QAV 157
>02_05_0417 -
28796121-28796743,28796829-28796925,28797010-28797093,
28797173-28797234,28797316-28797460,28797542-28797961,
28798041-28798090,28798163-28798349,28798426-28798680,
28798785-28798953,28799044-28799177,28799291-28799446,
28799534-28799719,28799798-28799962,28800074-28800190,
28800553-28800762,28800850-28801049,28801135-28801405,
28801481-28801547,28801644-28801942,28802425-28802991
Length = 1487
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/52 (32%), Positives = 26/52 (50%)
Frame = +3
Query: 114 EPTLKFGHIPLVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEP 269
EPT +P+V+ NGS GWS PN ++++A R+ + EP
Sbjct: 788 EPTWYVPILPMVLVNGSEGIGTGWSTF-IPNYNPRDIVANLRRLLNDEPVEP 838
>11_01_0484 -
3720376-3720671,3721209-3721767,3722209-3722640,
3723126-3723485
Length = 548
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 21 TYHVINYFFVSMDNILVLKDYKTVPDIVYEYEPTLKFGHIPLVIDNGSYQ---CRVGW 185
TYH+ NYF++ ++ + YKT Y + KF IP I + + CR G+
Sbjct: 309 TYHMRNYFWLDFPHLNNIYRYKTEE---YSHTAVNKFNVIPDSIPDWVFDFMPCRGGY 363
>10_05_0058 + 8662996-8663826
Length = 276
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +3
Query: 228 ARPRKDRCKKDAEPPVTPPIQIGNDIVNIEAVRFQLKTQFDKNVVTHFEAQEQVCD 395
A PRK C K E P P D +EA R +L+ ++ + + QV D
Sbjct: 190 AAPRKAACNKRKEAPALAPEM---DEAKLEAARKKLRERYRDEETAKKQRKIQVID 242
>07_03_0394 - 17633753-17636788
Length = 1011
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = -1
Query: 322 TASMFTISFPI*IGGVTG-GSASFLHLSFLGRAIKFLNIKFGSSHIDQPTLH*YDPLSIT 146
T ++T ++P+ + +G LHL+ A LN+ F S P +H PLSI
Sbjct: 701 TGRVYTHTYPLLVLHPSGVKKMGELHLAIRFTATSLLNVLFTYSRPLLPKMHYAQPLSIV 760
Query: 145 R 143
+
Sbjct: 761 Q 761
>05_04_0022 -
17217626-17217643,17217740-17217856,17217987-17218112,
17218194-17218340,17218423-17218533,17218625-17218747,
17218827-17218958,17219157-17219252,17219532-17219653,
17219833-17220130,17220213-17220458,17220711-17220852,
17221068-17222105,17222183-17222262,17222558-17222800,
17222907-17222967,17224059-17224675
Length = 1238
Score = 26.6 bits (56), Expect = 9.1
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = -1
Query: 430 PSASIDKCEKR*SHTCSCASKCVTTFLSNCVFN*NLTASMFTISF 296
P +D C+ + + S S+C LSN V N N S T ++
Sbjct: 358 PLYQVDDCDMKQNDLQSSRSQCSANSLSNSVLNINKADSYSTSNY 402
>03_06_0353 -
33317015-33318235,33318567-33318824,33319587-33319904,
33319949-33320011,33320103-33320496,33320684-33320796,
33320932-33321639,33321667-33323199,33323395-33323607,
33323718-33324700,33324890-33325423,33325694-33325820,
33326083-33326162,33327347-33327377,33327949-33328053,
33328119-33328124,33328349-33328985,33329144-33329478,
33330394-33331113
Length = 2792
Score = 26.6 bits (56), Expect = 9.1
Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = -2
Query: 210 LNLVL-HILTNQLCTDMIHYLSQEVYVQI*ALVHIRKQYQEQFYNL 76
LNLVL H+L N H+ Q+ Y L+H +Q +NL
Sbjct: 58 LNLVLNHVLHNPAALAAYHHQQQQQYHHHQQLLHSSAYHQNPTHNL 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,760,388
Number of Sequences: 37544
Number of extensions: 236814
Number of successful extensions: 499
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 499
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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