Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P12
         (448 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.          37   4e-04
U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.          37   4e-04
U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.          37   4e-04
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           37   4e-04
AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      31   0.025
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.          25   0.92 
DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor...    24   2.1  
AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.        23   6.5  
AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.        23   6.5  
AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.        23   6.5  
AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.        23   6.5  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   6.5  

>U02964-1|AAA03444.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.7 bits (81), Expect = 4e-04
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +3

Query: 144 LVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIVNIEAV 323
           LV+DNGS  C+ G++  + P  +F +++ RPR            +    +G++  +   +
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS---YVGDEAQSKRGI 65

Query: 324 RFQLKTQFDKNVVTHFEAQEQVCDYLF 404
              LK   +  +VT+++  E++  + F
Sbjct: 66  -LTLKYPIEHGIVTNWDDMEKIWHHTF 91


>U02933-1|AAA56882.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.7 bits (81), Expect = 4e-04
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +3

Query: 144 LVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIVNIEAV 323
           LV+DNGS  C+ G++  + P  +F +++ RPR            +    +G++  +   +
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS---YVGDEAQSKRGI 65

Query: 324 RFQLKTQFDKNVVTHFEAQEQVCDYLF 404
              LK   +  +VT+++  E++  + F
Sbjct: 66  -LTLKYPIEHGIVTNWDDMEKIWHHTF 91


>U02930-1|AAA56881.1|  376|Anopheles gambiae actin 1D protein.
          Length = 376

 Score = 36.7 bits (81), Expect = 4e-04
 Identities = 20/87 (22%), Positives = 43/87 (49%)
 Frame = +3

Query: 144 LVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIVNIEAV 323
           LV+DNGS  C+ G++  + P  +F +++ RPR            +    +G++  +   +
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDS---YVGDEAQSKRGI 65

Query: 324 RFQLKTQFDKNVVTHFEAQEQVCDYLF 404
              LK   +  +VT+++  E++  + F
Sbjct: 66  -LTLKYPIEHGIVTNWDDMEKIWHHTF 91


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 36.7 bits (81), Expect = 4e-04
 Identities = 19/87 (21%), Positives = 42/87 (48%)
 Frame = +3

Query: 144 LVIDNGSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTPPIQIGNDIVNIEAV 323
           LV+DNGS  C+ G++  + P  +F +++ RPR                 +G++  +   +
Sbjct: 9   LVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMG---NKDAYVGDEAQSKRGI 65

Query: 324 RFQLKTQFDKNVVTHFEAQEQVCDYLF 404
              LK   +  ++T+++  E++  + F
Sbjct: 66  -LTLKYPIEHGIITNWDDMEKIWHHTF 91


>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 30.7 bits (66), Expect = 0.025
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +3

Query: 159 GSYQCRVGWSICEEPNLIFKNLIARPRKDRCKKDAEPPVTP 281
           G  QC+VG      P L  K+++    +D C +D +PP +P
Sbjct: 128 GLLQCKVG---TVSPQLHGKSIVCCDNEDLCNQDLQPPYSP 165


>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
          Length = 1132

 Score = 25.4 bits (53), Expect = 0.92
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -2

Query: 207 NLVLHILTNQLCTDMIHYLSQEV 139
           N +LHI  +    D++HY+ +EV
Sbjct: 886 NNILHIAVDNDALDIVHYILEEV 908


>DQ989011-1|ABK97612.1|  467|Anopheles gambiae gustatory receptor 22
           protein.
          Length = 467

 Score = 24.2 bits (50), Expect = 2.1
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -3

Query: 323 HSFYVYYIISYLNRRCYRW 267
           H+F  Y+II+ LN  C  W
Sbjct: 232 HTFAYYHIIAMLNGFCSLW 250


>AY334004-1|AAR01129.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 354 NVVTHFEAQEQVCDYLFSH 410
           N    F  ++ VCDY FS+
Sbjct: 115 NCTFRFSDEKNVCDYRFSY 133


>AY334003-1|AAR01128.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 354 NVVTHFEAQEQVCDYLFSH 410
           N    F  ++ VCDY FS+
Sbjct: 115 NCTFRFSDEKNVCDYRFSY 133


>AY334002-1|AAR01127.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 354 NVVTHFEAQEQVCDYLFSH 410
           N    F  ++ VCDY FS+
Sbjct: 115 NCTFRFSDEKNVCDYRFSY 133


>AY334001-1|AAR01126.1|  194|Anopheles gambiae integrin protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 354 NVVTHFEAQEQVCDYLFSH 410
           N    F  ++ VCDY FS+
Sbjct: 115 NCTFRFSDEKNVCDYRFSY 133


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 22.6 bits (46), Expect = 6.5
 Identities = 8/19 (42%), Positives = 11/19 (57%)
 Frame = +3

Query: 354 NVVTHFEAQEQVCDYLFSH 410
           N    F  ++ VCDY FS+
Sbjct: 691 NCTFRFSDEKNVCDYRFSY 709


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 493,520
Number of Sequences: 2352
Number of extensions: 10284
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 37843779
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)