Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P11
         (468 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    24   0.71 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    24   0.71 
EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          21   6.6  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      21   6.6  
DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride c...    21   8.7  
DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride c...    21   8.7  
DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.               21   8.7  
AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl sub...    21   8.7  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 468 YEYYVSDNGSGVGGAAVLFMFMLGMFIYEKYRYFNAMIYENE 343
           Y++Y  + G  +  +  +  + LG F+ E+Y  F   IY  E
Sbjct: 31  YDFYPLERGE-LTNSGKMREYQLGQFLRERYGDFLGDIYTEE 71


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.2 bits (50), Expect = 0.71
 Identities = 12/42 (28%), Positives = 21/42 (50%)
 Frame = -1

Query: 468 YEYYVSDNGSGVGGAAVLFMFMLGMFIYEKYRYFNAMIYENE 343
           Y++Y  + G  +  +  +  + LG F+ E+Y  F   IY  E
Sbjct: 46  YDFYPLERGE-LTNSGKMREYQLGQFLRERYGDFLGDIYTEE 86


>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 317 HSNIEQNLNSFSYIIALKYRYF 382
           H+  EQ LN F+  + L + YF
Sbjct: 212 HNVPEQRLNYFTEDVGLNHFYF 233


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 317 HSNIEQNLNSFSYIIALKYRYF 382
           H+  EQ LN F+  + L + YF
Sbjct: 212 HNVPEQRLNYFTEDVGLNHFYF 233


>DQ667182-1|ABG75734.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 393 FIYEKYRYFNAMIYENEF 340
           F+ EK  YF+     NEF
Sbjct: 100 FVNEKQSYFHIATTSNEF 117


>DQ667181-1|ABG75733.1|  445|Apis mellifera GABA-gated chloride
           channel protein.
          Length = 445

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 393 FIYEKYRYFNAMIYENEF 340
           F+ EK  YF+     NEF
Sbjct: 100 FVNEKQSYFHIATTSNEF 117


>DQ435324-1|ABD92639.1|  152|Apis mellifera OBP3 protein.
          Length = 152

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 144 KKIVILIFKCCLRSHCL 194
           K IVIL+F  C+ S+ +
Sbjct: 2   KTIVILLFTLCIVSYMM 18


>AF094822-1|AAC63381.1|  365|Apis mellifera GABA receptor Rdl
           subunit protein.
          Length = 365

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 393 FIYEKYRYFNAMIYENEF 340
           F+ EK  YF+     NEF
Sbjct: 39  FVNEKQSYFHIATTSNEF 56


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,790
Number of Sequences: 438
Number of extensions: 2147
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)