Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P10
         (498 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    25   1.1  
AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein p...    25   1.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.6  

>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 11/30 (36%), Positives = 19/30 (63%)
 Frame = +2

Query: 50  FKYSK*ENFHFPVVLVYYTLCGVRLSYFIL 139
           F+ S+  NF+F ++L    LC + +SY I+
Sbjct: 593 FRASRSNNFYFALLLTMLFLCVLPVSYAIV 622


>AB090819-1|BAC57913.1|  400|Anopheles gambiae gag-like protein
           protein.
          Length = 400

 Score = 25.4 bits (53), Expect = 1.1
 Identities = 16/45 (35%), Positives = 27/45 (60%)
 Frame = +3

Query: 222 ALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPS 356
           A VR+TQ GD LL+   G+  ++RV   + + L  + ++ + APS
Sbjct: 204 AKVRRTQNGDMLLVLKRGKE-AVRVEAGIKNALKDKANVRTLAPS 247


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +3

Query: 144  AVILLPSTRETILKRRF---RLGTP 209
            A  LLP+TR  +LKR     R GTP
Sbjct: 1077 APALLPTTRTLLLKRPLVSARYGTP 1101


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,715
Number of Sequences: 2352
Number of extensions: 10310
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 44400195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)