Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P10
(498 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y09538-1|CAA70733.1| 452|Homo sapiens LIM-domain protein protein. 33 0.55
BX640940-1|CAE45970.1| 471|Homo sapiens hypothetical protein pr... 30 3.9
BX537525-1|CAD97773.1| 248|Homo sapiens hypothetical protein pr... 30 3.9
AY997296-1|AAY54245.1| 689|Homo sapiens zinc finger protein 185... 30 3.9
AK095258-1|BAC04511.1| 327|Homo sapiens protein ( Homo sapiens ... 30 3.9
AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molec... 29 6.8
BX276189-2|CAI95730.1| 1034|Homo sapiens teashirt family zinc fi... 29 9.0
AL121902-2|CAI95385.1| 1034|Homo sapiens teashirt family zinc fi... 29 9.0
AK091206-1|BAC03610.1| 1034|Homo sapiens protein ( Homo sapiens ... 29 9.0
>Y09538-1|CAA70733.1| 452|Homo sapiens LIM-domain protein protein.
Length = 452
Score = 33.1 bits (72), Expect = 0.55
Identities = 19/67 (28%), Positives = 32/67 (47%)
Frame = +3
Query: 195 RLGTPNGVEALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPSAPSTLE 374
R +P+G E LVR+ G +L G++++ +V GE + R G P+ P+
Sbjct: 213 RQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKV-GEAWQDRPRAPRGGQGDPAVPTQQP 271
Query: 375 MAPIYPD 395
P P+
Sbjct: 272 ADPSTPE 278
>BX640940-1|CAE45970.1| 471|Homo sapiens hypothetical protein
protein.
Length = 471
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 195 RLGTPNGVEALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPSAPSTLE 374
R +P+G E LVR+ G +L G++++ +V GE + G P+ P+
Sbjct: 232 RQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKV-GEAWQDRPGAPRGGQGDPAVPTQQP 290
Query: 375 MAPIYPD 395
P P+
Sbjct: 291 ADPSTPE 297
>BX537525-1|CAD97773.1| 248|Homo sapiens hypothetical protein
protein.
Length = 248
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 195 RLGTPNGVEALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPSAPSTLE 374
R +P+G E LVR+ G +L G++++ +V GE + G P+ P+
Sbjct: 126 RQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKV-GEAWQDRPGAPRGGQGDPAVPTQQP 184
Query: 375 MAPIYPD 395
P P+
Sbjct: 185 ADPSTPE 191
>AY997296-1|AAY54245.1| 689|Homo sapiens zinc finger protein 185
protein.
Length = 689
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 195 RLGTPNGVEALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPSAPSTLE 374
R +P+G E LVR+ G +L G++++ +V GE + G P+ P+
Sbjct: 450 RQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKV-GEAWQDRPGAPRGGQGDPAVPTQQP 508
Query: 375 MAPIYPD 395
P P+
Sbjct: 509 ADPSTPE 515
>AK095258-1|BAC04511.1| 327|Homo sapiens protein ( Homo sapiens
cDNA FLJ37939 fis, clone CTONG2007613, highly similar to
ZINC FINGER PROTEIN 185. ).
Length = 327
Score = 30.3 bits (65), Expect = 3.9
Identities = 18/67 (26%), Positives = 31/67 (46%)
Frame = +3
Query: 195 RLGTPNGVEALVRKTQVGDFLLLHLLGQNMSLRVFGEVLDELARRVHLGSNAPSAPSTLE 374
R +P+G E LVR+ G +L G++++ +V GE + G P+ P+
Sbjct: 88 RQSSPSGSEQLVRRESCGSSVLTDFEGKDVATKV-GEAWQDRPGAPRGGQGDPAVPTQQP 146
Query: 375 MAPIYPD 395
P P+
Sbjct: 147 ADPSTPE 153
>AY190519-1|AAO38848.1| 1692|Homo sapiens Rab3A-interacting molecule
protein.
Length = 1692
Score = 29.5 bits (63), Expect = 6.8
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 2/39 (5%)
Frame = -1
Query: 354 MVHWSPGGHVVPTHL--RLHQIRAATYSDPANVRAGSRQ 244
M H PGG P+ L R+H+ R+ T S PA+ SR+
Sbjct: 1229 MHHLVPGGSAPPSPLLTRMHRQRSPTQSPPADTSFSSRR 1267
>BX276189-2|CAI95730.1| 1034|Homo sapiens teashirt family zinc
finger 2 protein.
Length = 1034
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 402 YRCQDISAPFRE*TGLMVHWSPGGHVVPTHLRLHQIRAATYSDP 271
+RC+ SA + L VH + GH + + ++R +YS P
Sbjct: 215 FRCRQCSAAYDTLVELTVHMNETGHYQDDNRKKDKLRPTSYSKP 258
>AL121902-2|CAI95385.1| 1034|Homo sapiens teashirt family zinc
finger 2 protein.
Length = 1034
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 402 YRCQDISAPFRE*TGLMVHWSPGGHVVPTHLRLHQIRAATYSDP 271
+RC+ SA + L VH + GH + + ++R +YS P
Sbjct: 215 FRCRQCSAAYDTLVELTVHMNETGHYQDDNRKKDKLRPTSYSKP 258
>AK091206-1|BAC03610.1| 1034|Homo sapiens protein ( Homo sapiens
cDNA FLJ33887 fis, clone CTONG2007400, highly similar to
Mus musculus teashirt 2 (Tsh2) gene. ).
Length = 1034
Score = 29.1 bits (62), Expect = 9.0
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -1
Query: 402 YRCQDISAPFRE*TGLMVHWSPGGHVVPTHLRLHQIRAATYSDP 271
+RC+ SA + L VH + GH + + ++R +YS P
Sbjct: 215 FRCRQCSAAYDTLVELTVHMNETGHYQDDNRKKDKLRPTSYSKP 258
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,700,736
Number of Sequences: 237096
Number of extensions: 1429018
Number of successful extensions: 6668
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 6558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6657
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4536472160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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