Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P09
(479 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X13382-1|CAA31759.1| 407|Drosophila melanogaster protein ( Dros... 111 4e-25
X06881-1|CAA29998.1| 123|Drosophila melanogaster protein ( Dros... 111 4e-25
BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p pro... 111 4e-25
AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p pro... 111 4e-25
AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA... 111 4e-25
AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p pro... 33 0.15
AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative mic... 33 0.15
AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA... 33 0.15
BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p pro... 31 0.62
AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA... 31 0.62
X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription ... 29 4.4
BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p pro... 29 4.4
AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p pro... 29 4.4
AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA... 29 4.4
AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,... 29 4.4
AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,... 29 4.4
AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,... 29 4.4
AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,... 29 4.4
>X13382-1|CAA31759.1| 407|Drosophila melanogaster protein (
Drosophila melanogastermRNA for put. ribosomal protein
L1. ).
Length = 407
Score = 111 bits (268), Expect = 4e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 329 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 478
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 103 MSLSVARPLVSVYSEKSE 156
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>X06881-1|CAA29998.1| 123|Drosophila melanogaster protein (
Drosophila gene forribosomal protein L1 fragment. ).
Length = 123
Score = 111 bits (268), Expect = 4e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 329 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 478
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 4 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 53
>BT025959-1|ABG02203.1| 233|Drosophila melanogaster IP15855p
protein.
Length = 233
Score = 111 bits (268), Expect = 4e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 329 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 478
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 103 MSLSVARPLVSVYSEKSE 156
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AY069485-1|AAL39630.1| 401|Drosophila melanogaster LD21756p
protein.
Length = 401
Score = 111 bits (268), Expect = 4e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 329 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 478
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 103 MSLSVARPLVSVYSEKSE 156
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AE014297-4196|AAG22173.1| 401|Drosophila melanogaster CG5502-PA
protein.
Length = 401
Score = 111 bits (268), Expect = 4e-25
Identities = 48/50 (96%), Positives = 49/50 (98%)
Frame = +2
Query: 329 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWH 478
SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTK +RRWH
Sbjct: 66 SAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKTFRRWH 115
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +1
Query: 103 MSLSVARPLVSVYSEKSE 156
MSL ARPLVSVY+EK+E
Sbjct: 1 MSLGNARPLVSVYTEKNE 18
>AY071142-1|AAL48764.1| 572|Drosophila melanogaster RE17942p
protein.
Length = 572
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 411 PCPDLWVPPPRTRGIRATARPVPQDSALGLMTRP 310
P PD+W PPP+ + +P P A+G P
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAP 166
>AF223064-1|AAF34687.1| 571|Drosophila melanogaster putative
microtubule severingprotein katanin p60 subunit protein.
Length = 571
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 411 PCPDLWVPPPRTRGIRATARPVPQDSALGLMTRP 310
P PD+W PPP+ + +P P A+G P
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAP 166
>AE014297-195|AAF52059.2| 572|Drosophila melanogaster CG10229-PA
protein.
Length = 572
Score = 33.5 bits (73), Expect = 0.15
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -3
Query: 411 PCPDLWVPPPRTRGIRATARPVPQDSALGLMTRP 310
P PD+W PPP+ + +P P A+G P
Sbjct: 133 PDPDIWTPPPKDPDVWGPPKPPPTTQAVGRRAAP 166
>BT025138-1|ABE73309.1| 175|Drosophila melanogaster IP06825p
protein.
Length = 175
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 438 PPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSALGLMTRPP 307
PP LP P P PPP T T P P + L PP
Sbjct: 62 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAPTPAPTYLPPPPP 105
>AE014296-854|AAF47906.1| 172|Drosophila melanogaster CG15023-PA
protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.62
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 438 PPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSALGLMTRPP 307
PP LP P P PPP T T P P + L PP
Sbjct: 59 PPPTYLPPKPVPTYLPPPPPTTTTTTTTTPAPTPAPTYLPPPPP 102
>X79493-1|CAA56038.1| 838|Drosophila melanogaster transcription
factor protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 507 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 549
>BT011390-1|AAR96182.1| 624|Drosophila melanogaster GH01157p
protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 293 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 335
>AY071124-1|AAL48746.1| 420|Drosophila melanogaster RE17165p
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 441 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 331
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
>AE014296-850|AAF47902.2| 420|Drosophila melanogaster CG15021-PA
protein.
Length = 420
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = -3
Query: 441 RPPRHMLPNAPCPDLWVPPPRTRGIRATARPVPQDSA 331
RPP P+AP P PP+T R +P P A
Sbjct: 128 RPPPQPTPSAPAPPPSYGPPQTPPPRPPPQPTPSAPA 164
>AE014135-133|AAN06513.1| 624|Drosophila melanogaster CG1464-PB,
isoform B protein.
Length = 624
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 293 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 335
>AE014135-132|AAX52513.1| 857|Drosophila melanogaster CG1464-PC,
isoform C protein.
Length = 857
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 526 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 568
>AE014135-131|AAF59318.1| 838|Drosophila melanogaster CG1464-PA,
isoform A protein.
Length = 838
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 507 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 549
>AE014135-130|AAX52512.1| 898|Drosophila melanogaster CG1464-PD,
isoform D protein.
Length = 898
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +3
Query: 12 CAAVNSGTSGGWSLPPSIVFFGGITSLIKRNESVSSPTFSVGVFGEE 152
C+++ SG++GG PS+ G++S + +V++PT G+ E
Sbjct: 567 CSSLLSGSAGG----PSVSTINGLSSPSTLSTNVNAPTLGAGIDSSE 609
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,393,122
Number of Sequences: 53049
Number of extensions: 603886
Number of successful extensions: 1972
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1805
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1970
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1663799760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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