Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P08
(674 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 40 0.002
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 40 0.002
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 34 0.081
Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical pr... 31 0.75
AF043704-2|AAX88816.1| 407|Caenorhabditis elegans Prion-like-(q... 31 0.75
U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter... 31 0.99
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 31 0.99
AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical ... 30 1.3
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.0
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 3.0
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 29 3.0
AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical... 29 3.0
Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF000265-11|AAK68199.1| 298|Caenorhabditis elegans Hypothetical... 28 5.3
Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical pr... 27 9.2
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 27 9.2
AC199169-14|ABO33249.1| 389|Caenorhabditis elegans Hypothetical... 27 9.2
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 27 9.2
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = +2
Query: 164 EPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVN-ITEKNDE 340
EP+ + T+ T + EP TT+ + +STS + T+TT S + +T
Sbjct: 406 EPSTSTTTTEVTSTSSTVTTTEPT-TTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTS 464
Query: 341 PELMRSNINIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVK 520
+ + S + S T+T TSTTA + T P+S++ S +S V
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVT-----TSTTAPSTSTTGPSSSSSTPSSTASSSVS 519
Query: 521 ETPISIPFTTIEVRKTETIRNTEAT 595
T S +T +++ T +E T
Sbjct: 520 STASSTQSST-STQQSSTTTKSETT 543
Score = 35.5 bits (78), Expect = 0.035
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Frame = +2
Query: 230 PNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISM 409
P TTV S ++ST+ T+TT S + + + + ++ + + S
Sbjct: 281 PTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTST 340
Query: 410 TITEYGTPTSTTARAKFVTA-PASNTEEYHSIQASI--------VKETPISIPFTTIEVR 562
T T TS+ + T+ P + T E S +S+ + ET S FTT +
Sbjct: 341 TQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLT 400
Query: 563 KTETIRNTEATMT 601
T T + +T T
Sbjct: 401 STTTEEPSTSTTT 413
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 2/152 (1%)
Frame = +2
Query: 185 TSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNI 364
T+ L +EP+ +T ++++STS+ TT T+ + EP S +
Sbjct: 392 TTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPS--TSTV 449
Query: 365 NIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPAS--NTEEYHSIQASIVKETPISI 538
S + + ++ + + T T+ T+ T+P+S T ++ + S
Sbjct: 450 TTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSST 509
Query: 539 PFTTIEVRKTETIRNTEATMTILQQ*NLNQKE 634
P +T + T +T+++ + Q + E
Sbjct: 510 PSSTASSSVSSTASSTQSSTSTQQSSTTTKSE 541
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 2/159 (1%)
Frame = +2
Query: 80 TTTLSSLXXXXXXXXXXXXXXXXXXXATEPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKI 259
TTT+ + E T +TS + + + + +T+ S
Sbjct: 293 TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 260 SSTSAEQILKLTITTQTSVNITEK-NDEPELMRSNINIDRSKNNIFKGISMTITEYGTP- 433
SST+ L +I T T+ IT + P+ + + + + F +T T P
Sbjct: 353 SSTT----LSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPS 408
Query: 434 TSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTT 550
TSTT T+ T E + + T + P T+
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTS 447
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 39.9 bits (89), Expect = 0.002
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 1/145 (0%)
Frame = +2
Query: 164 EPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVN-ITEKNDE 340
EP+ + T+ T + EP TT+ + +STS + T+TT S + +T
Sbjct: 406 EPSTSTTTTEVTSTSSTVTTTEPT-TTLTTSTASTSTTEPSTSTVTTSPSTSPVTSTVTS 464
Query: 341 PELMRSNINIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVK 520
+ + S + S T+T TSTTA + T P+S++ S +S V
Sbjct: 465 SSSSSTTVTTPTSTESTSTSPSSTVT-----TSTTAPSTSTTGPSSSSSTPSSTASSSVS 519
Query: 521 ETPISIPFTTIEVRKTETIRNTEAT 595
T S +T +++ T +E T
Sbjct: 520 STASSTQSST-STQQSSTTTKSETT 543
Score = 35.5 bits (78), Expect = 0.035
Identities = 32/133 (24%), Positives = 54/133 (40%), Gaps = 9/133 (6%)
Frame = +2
Query: 230 PNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISM 409
P TTV S ++ST+ T+TT S + + + + ++ + + S
Sbjct: 281 PTTTTVTSTVTSTTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTST 340
Query: 410 TITEYGTPTSTTARAKFVTA-PASNTEEYHSIQASI--------VKETPISIPFTTIEVR 562
T T TS+ + T+ P + T E S +S+ + ET S FTT +
Sbjct: 341 TQQSSSTITSSPSSTTLSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLT 400
Query: 563 KTETIRNTEATMT 601
T T + +T T
Sbjct: 401 STTTEEPSTSTTT 413
Score = 33.1 bits (72), Expect = 0.19
Identities = 29/152 (19%), Positives = 62/152 (40%), Gaps = 2/152 (1%)
Frame = +2
Query: 185 TSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNI 364
T+ L +EP+ +T ++++STS+ TT T+ + EP S +
Sbjct: 392 TTFTTTMLTSTTTEEPSTSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPS--TSTV 449
Query: 365 NIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPAS--NTEEYHSIQASIVKETPISI 538
S + + ++ + + T T+ T+ T+P+S T ++ + S
Sbjct: 450 TTSPSTSPVTSTVTSSSSSSTTVTTPTSTESTSTSPSSTVTTSTTAPSTSTTGPSSSSST 509
Query: 539 PFTTIEVRKTETIRNTEATMTILQQ*NLNQKE 634
P +T + T +T+++ + Q + E
Sbjct: 510 PSSTASSSVSSTASSTQSSTSTQQSSTTTKSE 541
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/159 (20%), Positives = 57/159 (35%), Gaps = 2/159 (1%)
Frame = +2
Query: 80 TTTLSSLXXXXXXXXXXXXXXXXXXXATEPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKI 259
TTT+ + E T +TS + + + + +T+ S
Sbjct: 293 TTTVPTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSP 352
Query: 260 SSTSAEQILKLTITTQTSVNITEK-NDEPELMRSNINIDRSKNNIFKGISMTITEYGTP- 433
SST+ L +I T T+ IT + P+ + + + + F +T T P
Sbjct: 353 SSTT----LSTSIPTTTTPEITSTLSSLPDNAICSYLDETTTSTTFTTTMLTSTTTEEPS 408
Query: 434 TSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTT 550
TSTT T+ T E + + T + P T+
Sbjct: 409 TSTTTTEVTSTSSTVTTTEPTTTLTTSTASTSTTEPSTS 447
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/174 (20%), Positives = 51/174 (29%)
Frame = +2
Query: 80 TTTLSSLXXXXXXXXXXXXXXXXXXXATEPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKI 259
TTT ++ T T T+ T P TT +
Sbjct: 117 TTTPTTTTPTTTTTTPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTTTTTPT 176
Query: 260 SSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISMTITEYGTPTS 439
++T+ T TT T+ T + + T T TPT+
Sbjct: 177 TTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTT 236
Query: 440 TTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNTEATMT 601
TT T PA+ T E + + +T TT T T T T T
Sbjct: 237 TTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTT 290
Score = 29.1 bits (62), Expect = 3.0
Identities = 29/157 (18%), Positives = 44/157 (28%)
Frame = +2
Query: 80 TTTLSSLXXXXXXXXXXXXXXXXXXXATEPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKI 259
TTT ++ A T T+ V TT +
Sbjct: 169 TTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTTTTPTTTT 228
Query: 260 SSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISMTITEYGTPTS 439
++T+ T TT T+ T + + T T TPT+
Sbjct: 229 TTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTT 288
Query: 440 TTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTT 550
TT AK + + T+ + T PF T
Sbjct: 289 TTTTAKTTKSTTTTTKTTKTTSTPTTTTTTPKTPFDT 325
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 34.3 bits (75), Expect = 0.081
Identities = 22/65 (33%), Positives = 32/65 (49%)
Frame = +2
Query: 407 MTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNT 586
+T P S+TA + T+P++ T + Q+S V T P+TT E T T+ NT
Sbjct: 824 ITTGSTSAPQSSTAVSSTTTSPSTTTGSTPAPQSSTVASTTTVSPYTTTECICT-TVSNT 882
Query: 587 EATMT 601
T T
Sbjct: 883 FGTST 887
>Z75553-1|CAA99947.2| 320|Caenorhabditis elegans Hypothetical
protein ZC443.1 protein.
Length = 320
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = +2
Query: 221 VDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINI 370
+++ +V + K S T A+ +L+ T+ + + + K PE M+ NINI
Sbjct: 231 MNDKHVKALAQKYSKTPAQILLRATV--EMGIIVIPKTTNPERMKENINI 278
>AF043704-2|AAX88816.1| 407|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 72
protein.
Length = 407
Score = 31.1 bits (67), Expect = 0.75
Identities = 20/85 (23%), Positives = 35/85 (41%)
Frame = +2
Query: 230 PNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISM 409
P TT ++TS E + TT+ ++T + E N I+ + + +
Sbjct: 266 PITTTTAETTTTTSEEPTVTEETTTELVTDVTIALPDEEFEDINAKIETENHQLHQIEEN 325
Query: 410 TITEYGTPTSTTARAKFVTAPASNT 484
I+ TPTST + + +P T
Sbjct: 326 VISALSTPTSTISASPSPPSPLPTT 350
>U67956-2|AAB07691.2| 1254|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 6 protein.
Length = 1254
Score = 30.7 bits (66), Expect = 0.99
Identities = 24/120 (20%), Positives = 44/120 (36%)
Frame = +2
Query: 236 VTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISMTI 415
V T + ++T+ + + ITT+ E + E+ + + + + T
Sbjct: 519 VPTTTEEPTTTTGQHKTEKAITTEEPTTTEESSTTEEVTTTEEPANTGNPPTTENPTTTE 578
Query: 416 TEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNTEAT 595
T STT F T TEE + + S + P + ++ KT T + T
Sbjct: 579 QPTSTAESTTTALPFTTEQTVTTEEPTTAEKSTATQKPTTTQ-ESVSTEKTSTTKKASTT 637
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 30.7 bits (66), Expect = 0.99
Identities = 29/112 (25%), Positives = 39/112 (34%)
Frame = +2
Query: 215 LIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIF 394
++ D P VTT S SST+ T +T TS + T E + +
Sbjct: 174 VLTDIP-VTTTTSTTSSTTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTE 232
Query: 395 KGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTT 550
T T T +T T+ S T E S S + T S TT
Sbjct: 233 STTESTTESTSTSTDSTTTESTSTSTDSTTTE--STTESTTESTSTSTDSTT 282
>AC024880-2|AAF60914.4| 665|Caenorhabditis elegans Hypothetical
protein Y97E10AR.2a protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.3
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 6/130 (4%)
Frame = +2
Query: 224 DEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGI 403
DE R K SAE+ + + I S T + D+P L+ S+IN +
Sbjct: 80 DETWKEHTRRKGKGKSAEEKVHVDIVPIMSRK-TGEPDKPSLLDSSINATLV---VPPNS 135
Query: 404 SMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKE------TPISIPFTTIEVRK 565
++ I T T TT K T P++ T + + E +PI+ T+
Sbjct: 136 TIIIDTETTTTFTTTTEKPTTIPSTTTSSTTTTTTTTTTEEPTTTTSPIATTTTSTSTTT 195
Query: 566 TETIRNTEAT 595
TET +EAT
Sbjct: 196 TETPTTSEAT 205
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Frame = +2
Query: 299 TTQTSVNITEKNDEPELMRSNINIDRSKNNIF--KGISMTITEYGTPTSTTARAKFVTAP 472
TT TS T+K + S + K + T T T T+TT T P
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTP 645
Query: 473 ASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNT 586
T ++ +T + P TT++ +T+ T
Sbjct: 646 QPTTTTTSEKPVTLTTQTWTAPPTTTVKRTTPQTVPTT 683
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 2/98 (2%)
Frame = +2
Query: 299 TTQTSVNITEKNDEPELMRSNINIDRSKNNIF--KGISMTITEYGTPTSTTARAKFVTAP 472
TT TS T+K + S + K + T T T T+TT T P
Sbjct: 586 TTSTSSTTTQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTP 645
Query: 473 ASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNT 586
T ++ +T + P TT++ +T+ T
Sbjct: 646 QPTTTTTSEKPVTLTTQTWTAPPTTTVKRTTPQTVPTT 683
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.1 bits (62), Expect = 3.0
Identities = 27/131 (20%), Positives = 50/131 (38%)
Frame = +2
Query: 203 TLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSK 382
T+ IV ++ S T+ + T T +T + P + + + +
Sbjct: 527 TITGSIVTSTPTMAPQTSASPTTTPTHTTASQPTTTKPVVTTNSVTPSTGTTTVPVPTTT 586
Query: 383 NNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVR 562
+ + +T+ P+STT A VT P S + + + T ++P TT V
Sbjct: 587 GSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPV--TTTSLLTTLTTPTVPVTTTVVP 644
Query: 563 KTETIRNTEAT 595
+ T+ T T
Sbjct: 645 SSATVPTTPPT 655
>AL132898-18|CAC14411.2| 417|Caenorhabditis elegans Hypothetical
protein Y59A8B.13 protein.
Length = 417
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/101 (21%), Positives = 46/101 (45%), Gaps = 6/101 (5%)
Frame = +2
Query: 227 EPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGIS 406
+P T+R++ + T A +I + ++Q + +NDEP+++ + K +I +G
Sbjct: 215 KPPTVTIRARTNVTIAPKIQGVVTSSQPPPVVICRNDEPKIVWHLEKMCNKKEDISRGNP 274
Query: 407 MTI------TEYGTPTSTTARAKFVTAPASNTEEYHSIQAS 511
++I T + P +T A +S+ H+ S
Sbjct: 275 VSIPPQRLLTHHPPPPQSTRYYVSSHATSSSVTSLHNTSTS 315
>Z80789-1|CAB02551.1| 708|Caenorhabditis elegans Hypothetical
protein F48C11.2 protein.
Length = 708
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 383 NNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPI 532
NN ++ ++ T TPTSTT A T+ + + SI A+++ + P+
Sbjct: 101 NNFYEVVANTTGFSNTPTSTTTCAYIKTSSSGLVFDSCSIDANVLCDRPL 150
>AF000265-11|AAK68199.1| 298|Caenorhabditis elegans Hypothetical
protein C18E3.9a protein.
Length = 298
Score = 28.3 bits (60), Expect = 5.3
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 6/117 (5%)
Frame = +2
Query: 158 ATEPTRNVYTS---IYNRTLIPLIVDEPNVTTVRSKISSTSAEQIL---KLTITTQTSVN 319
A++P+RN Y + NR + E + +S +S S++QI TT+
Sbjct: 112 ASQPSRNEYDRSKYVLNRK-VRCAPTEIITDSSQSPGASPSSDQIFIDDSQPSTTKRRWV 170
Query: 320 ITEKNDEPELMRSNINIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEE 490
I+E +D + S+ + + I T+ + + S+ FVT P+S+ +E
Sbjct: 171 ISEPDDNSDKHVSSSENHQQREKIISPTEKTLQKSTSSNSSPTLKLFVTVPSSSNQE 227
>Z82264-1|CAB05159.1| 1566|Caenorhabditis elegans Hypothetical
protein C49C3.4 protein.
Length = 1566
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = +2
Query: 182 YTSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILK 289
YT++ N + D+P+ T RS++ +++A Q ++
Sbjct: 652 YTNVANDFTTNCVTDQPDATLARSEVQASTALQTIQ 687
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.5 bits (58), Expect = 9.2
Identities = 24/116 (20%), Positives = 41/116 (35%)
Frame = +2
Query: 227 EPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGIS 406
+PN + +K + + T T T+ T P S + + + + +
Sbjct: 236 DPNTLNIGAKYEWKKCGLVPETTKPTTTTPTTTTTTTIPSTTSSTTSTSTTTSVV---TT 292
Query: 407 MTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVRKTET 574
T+T PT++T+ T + T S + T S TTI K T
Sbjct: 293 TTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTSTTTTTSASTTTISTTKPPT 348
>AC199169-14|ABO33249.1| 389|Caenorhabditis elegans Hypothetical
protein F38A1.1 protein.
Length = 389
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = +2
Query: 188 SIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKN 334
SI IP+ P V+T + S Q + +T+ T T ITE+N
Sbjct: 157 SISTTQQIPITFAPPLVSTTQKITPVISTTQRMPVTVITSTQEPITEEN 205
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 27.5 bits (58), Expect = 9.2
Identities = 27/120 (22%), Positives = 46/120 (38%)
Frame = +2
Query: 239 TTVRSKISSTSAEQILKLTITTQTSVNITEKNDEPELMRSNINIDRSKNNIFKGISMTIT 418
TT++S ++ + +K T TT T+ T P + + + +M T
Sbjct: 202 TTMKSTPTTPTTPTTMKSTPTTPTTP--TTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 259
Query: 419 EYGTPTSTTARAKFVTAPASNTEEYHSIQASIVKETPISIPFTTIEVRKTETIRNTEATM 598
T TT ++ T T + + +K TP + P T ++ T T T TM
Sbjct: 260 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTT-PTTPTTMKSTPTTPTTPTTM 318
Score = 27.5 bits (58), Expect = 9.2
Identities = 33/146 (22%), Positives = 50/146 (34%)
Frame = +2
Query: 161 TEPTRNVYTSIYNRTLIPLIVDEPNVTTVRSKISSTSAEQILKLTITTQTSVNITEKNDE 340
T PT T T+ TT++S ++ + +K T TT T+ T
Sbjct: 277 TTPTTMKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP--TTMKST 334
Query: 341 PELMRSNINIDRSKNNIFKGISMTITEYGTPTSTTARAKFVTAPASNTEEYHSIQASIVK 520
P + + + +M T TPT+ T T P + T +
Sbjct: 335 PTTPTTPTTMKSTPTTPTTPTTMKSTPT-TPTTPTTMKSTPTTPTTPTTMKSTPTTPTTP 393
Query: 521 ETPISIPFTTIEVRKTETIRNTEATM 598
T S P T ++ T T T TM
Sbjct: 394 TTMKSTPTTPTTMKSTPTTPTTPTTM 419
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,407,460
Number of Sequences: 27780
Number of extensions: 229880
Number of successful extensions: 731
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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