Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P07
(512 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical pr... 33 0.12
Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical pr... 32 0.28
AF022974-7|AAC48042.2| 293|Caenorhabditis elegans Serpentine re... 31 0.37
AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical ... 30 0.85
Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical pr... 28 3.4
Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical pr... 28 4.5
U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein signa... 28 4.5
AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical ... 28 4.5
Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 6.0
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr... 27 6.0
U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna bindi... 27 6.0
U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna bindi... 27 6.0
AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3 ... 27 6.0
Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z81593-9|CAB04736.2| 318|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical pr... 27 7.9
Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical pr... 27 7.9
AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical ... 27 7.9
>Z72502-1|CAA96585.2| 430|Caenorhabditis elegans Hypothetical
protein C08B6.2 protein.
Length = 430
Score = 33.1 bits (72), Expect = 0.12
Identities = 19/50 (38%), Positives = 30/50 (60%)
Frame = +1
Query: 226 DSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAKNIKKRI 375
D+ + N+I+ D+SN E EN P D+E++ D + A+NIKK+I
Sbjct: 309 DTIPNNNENEILPDTSNVQDN--EIENNPKPDNEKLIKDDLSAENIKKKI 356
>Z35595-5|CAA84636.1| 952|Caenorhabditis elegans Hypothetical protein
C01G6.5 protein.
Length = 952
Score = 31.9 bits (69), Expect = 0.28
Identities = 32/131 (24%), Positives = 54/131 (41%), Gaps = 6/131 (4%)
Frame = +1
Query: 124 NSSDSDDDCYGNIAQKLQLIKNKYQKDKPDNSLNDSADFSTSNKIVSDSSNASFILIEDE 303
+S+DSD + G K ++K ++ + K+V D EDE
Sbjct: 744 SSADSDSEDDGRSGDKSTKRRDKARRSTRIGKSTPAKKVGKKEKVVED---------EDE 794
Query: 304 NVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQI---DVLVE---KPSRRNTKLTPVEND 465
+ + E+VT KN+K+ ++S K+ + DV E K R K TP E +
Sbjct: 795 TDDVQEEEKVTPRGGRRKNMKRTASQSAIKERKTKDKDVEPEEAPKKKRGRKKATPTEEE 854
Query: 466 TVPNAKSTTEK 498
P + + E+
Sbjct: 855 EPPKTEPSKER 865
>AF022974-7|AAC48042.2| 293|Caenorhabditis elegans Serpentine
receptor, class sx protein9 protein.
Length = 293
Score = 31.5 bits (68), Expect = 0.37
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = -1
Query: 503 LVFSVVLLAFGTVSFSTGVSFVFLLDGFSTRTSI*SCF 390
+V+ ++ + FGT+ S + +F TRTS+ CF
Sbjct: 12 VVYKILFIVFGTIGNSLFIHLIFKRKQLQTRTSVLQCF 49
>AL034543-2|CAA22515.1| 1696|Caenorhabditis elegans Hypothetical
protein Y81G3A.3 protein.
Length = 1696
Score = 30.3 bits (65), Expect = 0.85
Identities = 17/50 (34%), Positives = 25/50 (50%)
Frame = +1
Query: 289 LIEDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEKPSRRN 438
L+ DE++P+ E+ T ++ K IKKR R A L E P+ N
Sbjct: 993 LLNDEDLPMHTKEDATFRNLCEKVIKKRDGRMNAWLLDKQFKEEVPTSLN 1042
>Z69634-4|CAA93455.2| 674|Caenorhabditis elegans Hypothetical
protein B0001.6 protein.
Length = 674
Score = 28.3 bits (60), Expect = 3.4
Identities = 20/69 (28%), Positives = 30/69 (43%)
Frame = +1
Query: 241 STSNKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVE 420
S I+ SS+ F+ D+N LGDS T IA N+K+ Q+ V+ E
Sbjct: 12 SDETHILISSSHDIFVADPDQNTKLGDSVSFTTWD-IANNLKRASDIKPRNQIVESVVYE 70
Query: 421 KPSRRNTKL 447
+ +L
Sbjct: 71 QDQSLRLRL 79
>Z81525-3|CAB04258.1| 467|Caenorhabditis elegans Hypothetical
protein F33A8.4 protein.
Length = 467
Score = 27.9 bits (59), Expect = 4.5
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +2
Query: 368 NVLQDRRQNNFKLTFSWRNHQGEIQNLHQ 454
NV + RR+NNF ++ NHQ E Q Q
Sbjct: 26 NVFKARRRNNFSKRPNFHNHQQENQQEQQ 54
>Z75539-2|CAA99844.2| 555|Caenorhabditis elegans Hypothetical
protein F28C1.2 protein.
Length = 555
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 199 KDKPDNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAKNIKKRIT 378
+ +P+ +ND+ DF +KI D L ED EE+ DS+ + ++K +
Sbjct: 387 QSQPNPWINDTVDFWQHDKITGDIQTRRLKLWED------SFEELLADSLGRETLQKFLD 440
Query: 379 RS-TAKQLQIDVLVEKPSRRNTKLTPV 456
+ + + L+ V+K + ++++ PV
Sbjct: 441 KEYSGENLRFWWEVQKLRKCSSRMVPV 467
>U32326-1|AAC46965.1| 555|Caenorhabditis elegans G protein
signaling regulator protein.
Length = 555
Score = 27.9 bits (59), Expect = 4.5
Identities = 21/87 (24%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +1
Query: 199 KDKPDNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAKNIKKRIT 378
+ +P+ +ND+ DF +KI D L ED EE+ DS+ + ++K +
Sbjct: 387 QSQPNPWINDTVDFWQHDKITGDIQTRRLKLWED------SFEELLADSLGRETLQKFLD 440
Query: 379 RS-TAKQLQIDVLVEKPSRRNTKLTPV 456
+ + + L+ V+K + ++++ PV
Sbjct: 441 KEYSGENLRFWWEVQKLRKCSSRMVPV 467
>AF101312-4|AAC69220.1| 358|Caenorhabditis elegans Hypothetical
protein F56E10.1 protein.
Length = 358
Score = 27.9 bits (59), Expect = 4.5
Identities = 18/58 (31%), Positives = 35/58 (60%)
Frame = +1
Query: 196 QKDKPDNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAKNIKK 369
++D+ D+ +S D S S+ + ++S N+ + +++EN EE+T ++ AK IKK
Sbjct: 57 EEDEEDSDEEESEDDSDSS-VDTESVNSVWSNVDEEN-----GEEITTEAAEAKIIKK 108
>Z81593-2|CAB04737.1| 260|Caenorhabditis elegans Hypothetical
protein T20B3.2 protein.
Length = 260
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 286 ILIEDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEKPSRRNTKLTP 453
+LIEDEN+ G + + ++ A+ ++R + + +++ +K S++ LTP
Sbjct: 1 MLIEDENIRYGGA-QADVEDDAARKAQERELKKAEVRKRMEEAAKKGSKKKGFLTP 55
>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 211 DNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDS----IIAKNIKKRIT 378
D S N+SADF + ++ +D ++A ++ + L +E +T + A IKKR+
Sbjct: 28 DESFNESADFLNNEELNNDQNDAENTVLSEGVSTLRINENMTKEDRACISAALFIKKRVV 87
Query: 379 RS 384
S
Sbjct: 88 ES 89
>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical
protein F29D11.2 protein.
Length = 1153
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Frame = +1
Query: 211 DNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEEVTIDS----IIAKNIKKRIT 378
D S N+SADF + ++ +D ++A ++ + L +E +T + A IKKR+
Sbjct: 28 DESFNESADFLNNEELNNDQNDAENTVLSEGVSTLRINENMTKEDRACISAALFIKKRVV 87
Query: 379 RS 384
S
Sbjct: 88 ES 89
>U23515-7|AAK93859.3| 868|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform a protein.
Length = 868
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 EDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEKPSRRNTKLTPVENDTVP 474
E +PL + T DS+ K K+R S E ++ + P+ T P
Sbjct: 579 EPPEIPLPSGTQPTPDSVWTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAP 638
Query: 475 -NAKSTTEK 498
+AKS +K
Sbjct: 639 LDAKSPRKK 647
>U23515-6|ABC71805.1| 1065|Caenorhabditis elegans Larp (rna binding
la related protein)homolog protein 1, isoform b protein.
Length = 1065
Score = 27.5 bits (58), Expect = 6.0
Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Frame = +1
Query: 295 EDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEKPSRRNTKLTPVENDTVP 474
E +PL + T DS+ K K+R S E ++ + P+ T P
Sbjct: 776 EPPEIPLPSGTQPTPDSVWTKKAKERAAASVTVPKSPMQRRESEEQKMNRFYPISKPTAP 835
Query: 475 -NAKSTTEK 498
+AKS +K
Sbjct: 836 LDAKSPRKK 844
>AB107359-1|BAD89380.1| 260|Caenorhabditis elegans troponin I 3
protein.
Length = 260
Score = 27.5 bits (58), Expect = 6.0
Identities = 14/56 (25%), Positives = 31/56 (55%)
Frame = +1
Query: 286 ILIEDENVPLGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEKPSRRNTKLTP 453
+LIEDEN+ G + + ++ A+ ++R + + +++ +K S++ LTP
Sbjct: 1 MLIEDENIRYGGA-QADVEDDAARKAQERELKKAEVRKRMEEAAKKGSKKKGFLTP 55
>Z82084-4|CAB04980.1| 667|Caenorhabditis elegans Hypothetical
protein ZK1053.4 protein.
Length = 667
Score = 27.1 bits (57), Expect = 7.9
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +1
Query: 160 IAQKLQLIKNKYQKDKPDNSLNDSADFSTSNKIVSDSSNASFILIEDENVPLGDSEE 330
I + +L+ PD+SL S + ++I SS+ S + I +E+ +SEE
Sbjct: 128 IDETTELLAKCASSGPPDHSLRSSILETLFSEIKGKSSDVSLVTISEESEKSEESEE 184
>Z81593-9|CAB04736.2| 318|Caenorhabditis elegans Hypothetical
protein T20B3.7 protein.
Length = 318
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = +1
Query: 202 DKPDNSLNDSADFSTSNKIVSDSSNASFILIEDENV 309
++ D + ++DF TS + +N SFI ED NV
Sbjct: 114 EQRDLEIQKTSDFGTSIETTHRRANGSFIPPEDSNV 149
>Z32680-2|CAA83597.1| 1218|Caenorhabditis elegans Hypothetical
protein C28A5.2 protein.
Length = 1218
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 181 LTGVFELYYRSNHRPSLKSSFLYNL 107
+T +FELYYR P + S +Y +
Sbjct: 176 ITPIFELYYRETTLPYIAESMVYGV 200
>Z32680-1|CAA83599.1| 1223|Caenorhabditis elegans Hypothetical
protein C28A5.1 protein.
Length = 1223
Score = 27.1 bits (57), Expect = 7.9
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 181 LTGVFELYYRSNHRPSLKSSFLYNL 107
+T +FELYYR P + S +Y +
Sbjct: 176 ITPIFELYYRETTLPYIAESMVYGV 200
>AF039038-6|AAK21431.2| 629|Caenorhabditis elegans Hypothetical
protein K06A5.1 protein.
Length = 629
Score = 27.1 bits (57), Expect = 7.9
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 1/59 (1%)
Frame = +1
Query: 313 LGDSEEVTIDSIIAKNIKKRITRSTAKQLQIDVLVEK-PSRRNTKLTPVENDTVPNAKS 486
+G S+ D +I + +TR + + + L+E P ++ P + T+P +S
Sbjct: 250 MGRSQSKASDDVIISEVSPIVTRRSRSRSHVSSLMENPPPLTRSRSIPQKATTIPTTRS 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.132 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,906,640
Number of Sequences: 27780
Number of extensions: 183687
Number of successful extensions: 694
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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