Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P07
(512 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 25 0.61
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 25 0.61
DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein. 24 1.1
DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein. 23 1.9
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 4.3
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 22 4.3
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 22 4.3
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 22 4.3
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 5.7
AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synth... 21 5.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 7.5
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 7.5
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.5
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.5
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.5
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 7.5
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 9.9
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 24.6 bits (51), Expect = 0.61
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 504 SCFLCCTLGIRYCIILYWCKF 442
+C L C I Y IIL W F
Sbjct: 104 TCVLSCWTNIYYIIILAWALF 124
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 24.6 bits (51), Expect = 0.61
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = -3
Query: 504 SCFLCCTLGIRYCIILYWCKF 442
+C L C I Y IIL W F
Sbjct: 157 TCVLSCWTNIYYIIILAWALF 177
>DQ435325-1|ABD92640.1| 160|Apis mellifera OBP7 protein.
Length = 160
Score = 23.8 bits (49), Expect = 1.1
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 394 QLQIDVLVEKPSRRNTKLTPVENDTVPNAKSTTEK 498
++Q+D LVE +R+N + NA +T+K
Sbjct: 93 EIQLDKLVEMANRKNISIDVKMLSECINANKSTDK 127
>DQ435332-1|ABD92647.1| 135|Apis mellifera OBP15 protein.
Length = 135
Score = 23.0 bits (47), Expect = 1.9
Identities = 17/50 (34%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Frame = +1
Query: 250 NKIVSDSSNASFILIEDENVPLGDSEEVTIDSIIAK--NIKKRITRSTAK 393
NK + + N I IEDENV L + S + K N + ++R AK
Sbjct: 40 NKQIINDVNDGKINIEDENVQLYIECAMKKFSFVDKDGNFNEHVSREIAK 89
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = +1
Query: 154 GNIAQKLQLIKNKYQK 201
G +A+++Q+ KN++QK
Sbjct: 305 GYMAKRIQMRKNRFQK 320
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = +1
Query: 154 GNIAQKLQLIKNKYQK 201
G +A+++Q+ KN++QK
Sbjct: 305 GYMAKRIQMRKNRFQK 320
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.8 bits (44), Expect = 4.3
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 254 LLDVEKSAESFNELSGLSFWYLF 186
+LD +S SF +GL F Y F
Sbjct: 918 MLDTYESVHSFPTETGLPFVYTF 940
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.8 bits (44), Expect = 4.3
Identities = 7/16 (43%), Positives = 14/16 (87%)
Frame = +1
Query: 154 GNIAQKLQLIKNKYQK 201
G +A+++Q+ KN++QK
Sbjct: 244 GYMAKRIQMRKNRFQK 259
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 5.7
Identities = 10/40 (25%), Positives = 18/40 (45%)
Frame = +1
Query: 124 NSSDSDDDCYGNIAQKLQLIKNKYQKDKPDNSLNDSADFS 243
+ D D+ NI + + + D+ NS++ A FS
Sbjct: 86 DDKDDDESDNENIKSQKEFPNSSSSDDERPNSIHQRASFS 125
>AY343324-1|AAQ21381.1| 156|Apis mellifera vacuolar H+ ATP synthase
16 kDa proteolipidsubunit protein.
Length = 156
Score = 21.4 bits (43), Expect = 5.7
Identities = 10/55 (18%), Positives = 28/55 (50%)
Frame = -1
Query: 503 LVFSVVLLAFGTVSFSTGVSFVFLLDGFSTRTSI*SCFAVDLVIRFLMFLAIILS 339
++FS + A+GT TG++ + ++ SI ++ + + +A++++
Sbjct: 22 IIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAIYGLVVAVLIA 76
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 57 RKYGETSKERSRNRTERE 74
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 57 RKYGETSKERSRNRTERE 74
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 57 RKYGETSKERSRNRTERE 74
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 57 RKYGETSKERSRNRTERE 74
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRNRTERE 307
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRNRTERE 307
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRNRTERE 307
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRNRTERE 307
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRNRTERE 307
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.5
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 279 RKYGETSKERSRNRTERE 296
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 7.5
Identities = 5/18 (27%), Positives = 11/18 (61%)
Frame = -3
Query: 426 WFLHENVNLKLFCRRSCN 373
+++H+ + + C R CN
Sbjct: 235 YYMHQQIMARYNCERLCN 252
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.6 bits (41), Expect = 9.9
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = +3
Query: 408 RSRGETIKEKYKTYTSRE 461
R GET KE+ + T RE
Sbjct: 290 RKYGETSKERSRDRTERE 307
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.132 0.367
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,234
Number of Sequences: 438
Number of extensions: 2497
Number of successful extensions: 22
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14232156
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -