Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P06
(236 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17214-1|AAA28507.1| 122|Drosophila melanogaster protein ( D.me... 29 0.66
AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p pro... 27 3.5
AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA... 27 3.5
AY118361-1|AAM48390.1| 622|Drosophila melanogaster RE07082p pro... 27 4.6
AY061018-1|AAL28566.1| 383|Drosophila melanogaster HL03862p pro... 27 4.6
AE014298-1223|AAF46406.1| 622|Drosophila melanogaster CG1787-PA... 27 4.6
AE014296-822|AAN11597.1| 383|Drosophila melanogaster CG1318-PC,... 27 4.6
AE014296-821|AAN11596.1| 606|Drosophila melanogaster CG1318-PD,... 27 4.6
AE014296-820|AAG22248.1| 622|Drosophila melanogaster CG1318-PB,... 27 4.6
AE014296-819|AAF47881.1| 622|Drosophila melanogaster CG1318-PA,... 27 4.6
AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p pro... 26 6.1
AY061037-1|AAL28585.1| 359|Drosophila melanogaster HL07462p pro... 26 6.1
AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes ... 26 6.1
AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC... 26 6.1
AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB... 26 6.1
AY118626-1|AAM49995.1| 606|Drosophila melanogaster RE27784p pro... 26 8.1
>M17214-1|AAA28507.1| 122|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 122
Score = 29.5 bits (63), Expect = 0.66
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = -1
Query: 179 HQRIAPVSTSSCHSQAPWCSHCKLPP-CIIPNTIHAFSQ 66
H+R APV ++C S+C L P C++ +H Q
Sbjct: 32 HKRNAPVQCTNCQEYGHTRSYCTLAPVCVVCGDLHDSKQ 70
>AY052131-1|AAK93555.1| 510|Drosophila melanogaster SD08104p
protein.
Length = 510
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 200 MHL-SQGQHQRIAPVSTSSCHSQAPWCSHCK 111
+HL SQG + ++ APWC HCK
Sbjct: 274 VHLTSQGFEPALKDEKSALVMFYAPWCGHCK 304
>AE014134-2339|AAF53293.1| 510|Drosophila melanogaster CG9302-PA
protein.
Length = 510
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -1
Query: 200 MHL-SQGQHQRIAPVSTSSCHSQAPWCSHCK 111
+HL SQG + ++ APWC HCK
Sbjct: 274 VHLTSQGFEPALKDEKSALVMFYAPWCGHCK 304
>AY118361-1|AAM48390.1| 622|Drosophila melanogaster RE07082p
protein.
Length = 622
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 152 SSCHSQAPWCSHCKLPPC 99
S C +Q+PW C PPC
Sbjct: 346 SVCLNQSPWRRFCVQPPC 363
>AY061018-1|AAL28566.1| 383|Drosophila melanogaster HL03862p
protein.
Length = 383
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 69 HVGEGWQHKNM-----TACFNAQPWKSFCVEPPC 97
>AE014298-1223|AAF46406.1| 622|Drosophila melanogaster CG1787-PA
protein.
Length = 622
Score = 26.6 bits (56), Expect = 4.6
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 152 SSCHSQAPWCSHCKLPPC 99
S C +Q+PW C PPC
Sbjct: 346 SVCLNQSPWRRFCVQPPC 363
>AE014296-822|AAN11597.1| 383|Drosophila melanogaster CG1318-PC,
isoform C protein.
Length = 383
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 69 HVGEGWQHKNM-----TACFNAQPWKSFCVEPPC 97
>AE014296-821|AAN11596.1| 606|Drosophila melanogaster CG1318-PD,
isoform D protein.
Length = 606
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 308 HVGEGWQHKNM-----TACFNAQPWKSFCVEPPC 336
>AE014296-820|AAG22248.1| 622|Drosophila melanogaster CG1318-PB,
isoform B protein.
Length = 622
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 308 HVGEGWQHKNM-----TACFNAQPWKSFCVEPPC 336
>AE014296-819|AAF47881.1| 622|Drosophila melanogaster CG1318-PA,
isoform A protein.
Length = 622
Score = 26.6 bits (56), Expect = 4.6
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 308 HVGEGWQHKNM-----TACFNAQPWKSFCVEPPC 336
>AY113418-1|AAM29423.1| 660|Drosophila melanogaster RE17456p
protein.
Length = 660
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 146 CHSQAPWCSHCKLPPC 99
C +Q PW +C PPC
Sbjct: 389 CINQQPWSFYCGEPPC 404
>AY061037-1|AAL28585.1| 359|Drosophila melanogaster HL07462p
protein.
Length = 359
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 146 CHSQAPWCSHCKLPPC 99
C +Q PW +C PPC
Sbjct: 88 CINQQPWSFYCGEPPC 103
>AF323977-1|AAL55992.1| 660|Drosophila melanogaster fused lobes
protein.
Length = 660
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 146 CHSQAPWCSHCKLPPC 99
C +Q PW +C PPC
Sbjct: 389 CINQQPWSFYCGEPPC 404
>AE013599-1505|AAM68692.1| 660|Drosophila melanogaster CG8824-PC,
isoform C protein.
Length = 660
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 146 CHSQAPWCSHCKLPPC 99
C +Q PW +C PPC
Sbjct: 389 CINQQPWSFYCGEPPC 404
>AE013599-1504|AAM68691.2| 673|Drosophila melanogaster CG8824-PB,
isoform B protein.
Length = 673
Score = 26.2 bits (55), Expect = 6.1
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -1
Query: 146 CHSQAPWCSHCKLPPC 99
C +Q PW +C PPC
Sbjct: 402 CINQQPWSFYCGEPPC 417
>AY118626-1|AAM49995.1| 606|Drosophila melanogaster RE27784p
protein.
Length = 606
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/34 (35%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -1
Query: 197 HLSQG-QHQRIAPVSTSSCHSQAPWCSHCKLPPC 99
H+ +G QH+ + ++C + PW S C PPC
Sbjct: 308 HVGEGWQHKNM-----TACFNAQPWKSLCVEPPC 336
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,610,547
Number of Sequences: 53049
Number of extensions: 191051
Number of successful extensions: 561
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 540
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 561
length of database: 24,988,368
effective HSP length: 58
effective length of database: 21,911,526
effective search space used: 438230520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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