Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P06
         (236 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    23   0.67 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    23   0.67 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   0.67 
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   2.7  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          20   3.6  
DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.               20   3.6  
AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.           20   4.7  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    19   6.2  
DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic acetylcholi...    19   8.3  
DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic acetylcholi...    19   8.3  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    19   8.3  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    19   8.3  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    19   8.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             19   8.3  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 CTRVLANDTMKWKLELFSGVVLEKDASGEN 211
           C R+L ND ++  +  F GV+  KD    N
Sbjct: 272 CFRLLMNDILRPYVPEFKGVLDVKDVEEGN 301


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 CTRVLANDTMKWKLELFSGVVLEKDASGEN 211
           C R+L ND ++  +  F GV+  KD    N
Sbjct: 187 CFRLLMNDILRPYVPEFKGVLDVKDVEEGN 216


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 22.6 bits (46), Expect = 0.67
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 122 CTRVLANDTMKWKLELFSGVVLEKDASGEN 211
           C R+L ND ++  +  F GV+  KD    N
Sbjct: 506 CFRLLMNDILRPYVPEFKGVLDVKDVEEGN 535



 Score = 20.2 bits (40), Expect = 3.6
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = -3

Query: 117 LQATTMHNTKHNTRIFSKF 61
           L +T  + +KHNT+ F+++
Sbjct: 380 LGSTETYYSKHNTQQFTQY 398


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 2.7
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = +2

Query: 5    CMNSARGAFVRVNPDN 52
            C ++    + R+NPDN
Sbjct: 1466 CWHAVMTTYPRINPDN 1481


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +2

Query: 170 FSGVVLEKDASGENKLNVKFE 232
           +SG  L  D + ENKLN   E
Sbjct: 205 YSGWYLNHDYNLENKLNYFIE 225


>DQ435325-1|ABD92640.1|  160|Apis mellifera OBP7 protein.
          Length = 160

 Score = 20.2 bits (40), Expect = 3.6
 Identities = 9/49 (18%), Positives = 23/49 (46%)
 Frame = -3

Query: 219 LSLFSPDASFSRTTPENSSSFHFIVSFASTLVQPLQATTMHNTKHNTRI 73
           + + S   + +++T +  +  +FI+ F+  L    + T     KH + +
Sbjct: 112 VKMLSECINANKSTDKCENGLNFIICFSKLLSDMYEDTFEDTLKHKSYV 160


>AJ308527-1|CAC33429.1|   57|Apis mellifera defensin protein.
          Length = 57

 Score = 19.8 bits (39), Expect = 4.7
 Identities = 7/19 (36%), Positives = 10/19 (52%)
 Frame = -1

Query: 152 SSCHSQAPWCSHCKLPPCI 96
           ++CHS      HC+   CI
Sbjct: 37  ANCHSLGKAGGHCEKGVCI 55


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.4 bits (38), Expect = 6.2
 Identities = 5/10 (50%), Positives = 8/10 (80%)
 Frame = +3

Query: 153 SGNWSYSLVL 182
           SGNWS+  ++
Sbjct: 104 SGNWSFGTIM 113


>DQ026036-1|AAY87895.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = +1

Query: 52 LQSKF*ENACIVFGIM 99
          LQ++   ++C++FG++
Sbjct: 7  LQAESDVSSCVIFGVL 22


>DQ026035-1|AAY87894.1|  529|Apis mellifera nicotinic
          acetylcholine receptor alpha6subunit protein.
          Length = 529

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/16 (31%), Positives = 13/16 (81%)
 Frame = +1

Query: 52 LQSKF*ENACIVFGIM 99
          LQ++   ++C++FG++
Sbjct: 7  LQAESDVSSCVIFGVL 22


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = -1

Query: 200 MHLSQGQHQRIAPVSTSSCHSQ 135
           M   QGQHQ  A       H Q
Sbjct: 179 MQPQQGQHQSQAQQQHLQAHEQ 200


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 125 CSHCKLPPCI 96
           C +C+L  CI
Sbjct: 71  CQYCRLKKCI 80


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = -1

Query: 125 CSHCKLPPCI 96
           C +C+L  CI
Sbjct: 120 CQYCRLKKCI 129


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.0 bits (37), Expect = 8.3
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 194 LSQGQHQRIAPVSTSSC 144
           L+   H R+ P  +SSC
Sbjct: 63  LTAQAHHRLYPAFSSSC 79


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,325
Number of Sequences: 438
Number of extensions: 1135
Number of successful extensions: 26
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3898467
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)