Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_P05
(349 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-15|AAO21409.1| 521|Caenorhabditis elegans Udp-glucuron... 28 1.6
Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical pr... 27 3.7
U42848-5|AAN84855.1| 283|Caenorhabditis elegans Hypothetical pr... 27 3.7
U42848-4|AAA83610.2| 302|Caenorhabditis elegans Hypothetical pr... 27 3.7
AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein. 27 3.7
AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical ... 27 3.7
AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical ... 27 3.7
Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical pr... 26 8.5
Z68299-1|CAA92609.1| 390|Caenorhabditis elegans Hypothetical pr... 26 8.5
AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical ... 26 8.5
>AC025716-15|AAO21409.1| 521|Caenorhabditis elegans
Udp-glucuronosyltransferase protein31 protein.
Length = 521
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 93 SCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 200
+C+ + I +TT A T I K + KTE HV +
Sbjct: 107 TCFEFFIQMMQTTCAEFTSNREIFKKLSKTEFHVAI 142
>Z77656-3|CAB01140.1| 424|Caenorhabditis elegans Hypothetical
protein F07B10.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 39 FFFFLNIPPIYFIETYSPSCYSYNINWNKTTSAAS 143
+FF L IPP + T PS + N++K A+
Sbjct: 195 YFFLLTIPPTVYSPTIHPSTWIIPKNYDKDVFEAA 229
>U42848-5|AAN84855.1| 283|Caenorhabditis elegans Hypothetical
protein C31H1.6b protein.
Length = 283
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 102 SYNINWNKTTSAASTPTLFIM 164
SYNINW K S PT I+
Sbjct: 56 SYNINWTKLFQECSEPTYTIL 76
>U42848-4|AAA83610.2| 302|Caenorhabditis elegans Hypothetical
protein C31H1.6a protein.
Length = 302
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +3
Query: 102 SYNINWNKTTSAASTPTLFIM 164
SYNINW K S PT I+
Sbjct: 75 SYNINWTKLFQECSEPTYTIL 95
>AF326788-1|AAK38269.1| 424|Caenorhabditis elegans CLN-3.1 protein.
Length = 424
Score = 27.1 bits (57), Expect = 3.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 39 FFFFLNIPPIYFIETYSPSCYSYNINWNKTTSAAS 143
+FF L IPP + T PS + N++K A+
Sbjct: 195 YFFLLTIPPTVYSPTIHPSTWIIPKNYDKDVFEAA 229
>AF003151-4|AAK18918.2| 142|Caenorhabditis elegans Hypothetical
protein D1007.13a protein.
Length = 142
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 54 NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 155
+IP Y T++PS Y + +W T PT+
Sbjct: 40 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 73
>AF003151-3|ABJ99067.1| 247|Caenorhabditis elegans Hypothetical
protein D1007.13b protein.
Length = 247
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +3
Query: 54 NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 155
+IP Y T++PS Y + +W T PT+
Sbjct: 145 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 178
>Z68301-8|CAA92626.2| 484|Caenorhabditis elegans Hypothetical
protein W01B6.3 protein.
Length = 484
Score = 26.6 bits (56), Expect = 4.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = -1
Query: 211 ILNRTTTWASVFLTSFIIKRVGVDAAL 131
+L+R T W SV++ SF++ G+ ++
Sbjct: 15 LLDRKTPWKSVYVVSFLLLLTGLQMSI 41
>Z70205-4|CAA94115.2| 528|Caenorhabditis elegans Hypothetical
protein C11H1.5 protein.
Length = 528
Score = 25.8 bits (54), Expect = 8.5
Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Frame = +3
Query: 12 RERE-LVSSFFFFFLNIPPIYFIETYSPSCYSYNINWNKTTSAASTPTLFIMKLVKKTEA 188
R+R+ L++S + N P I+ Y PS +I++ T + STPT + T A
Sbjct: 299 RQRQSLMNSGYLSPSNTAPTV-IKPYPPSSTESSIDFTTATESTSTPTSTTSDITSTTTA 357
>Z68299-1|CAA92609.1| 390|Caenorhabditis elegans Hypothetical
protein T04B2.2 protein.
Length = 390
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 4/33 (12%)
Frame = +3
Query: 45 FFLNIPP----IYFIETYSPSCYSYNINWNKTT 131
F LN+ P YF T+ S S INW+ TT
Sbjct: 71 FMLNMDPTSNKFYFEHTHQESTISELINWHMTT 103
>AL032657-1|CAA21732.1| 377|Caenorhabditis elegans Hypothetical
protein Y47H9C.1 protein.
Length = 377
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/32 (46%), Positives = 19/32 (59%)
Frame = +3
Query: 105 YNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 200
YNIN TTS ST T F MK + ++ +VV
Sbjct: 233 YNINGTNTTSVYST-TGFYMKPAGEDDSTIVV 263
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,401,864
Number of Sequences: 27780
Number of extensions: 77266
Number of successful extensions: 240
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 239
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 240
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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