Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_P02
         (557 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC029884-1|AAH29884.1|  200|Homo sapiens membrane-spanning 4-dom...    34   0.39 
AF321127-1|AAK01641.1|  200|Homo sapiens testis-expressed transm...    34   0.39 
AF237907-1|AAK37416.1|  200|Homo sapiens MS4A5 protein protein.        34   0.39 
AB013103-1|BAB18739.1|  200|Homo sapiens MS4A5 protein.                34   0.39 
BC104794-1|AAI04795.1|  312|Homo sapiens olfactory receptor, fam...    30   6.3  
BC104792-1|AAI04793.1|  312|Homo sapiens olfactory receptor, fam...    30   6.3  
AB065597-1|BAC05825.1|  312|Homo sapiens seven transmembrane hel...    30   6.3  
AB013076-1|BAA25794.1|  338|Homo sapiens loricrin protein.             29   8.4  

>BC029884-1|AAH29884.1|  200|Homo sapiens membrane-spanning
           4-domains, subfamily A, member 5 protein.
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 359 IMTFIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFLNLLELEIKHKCSGKLIIIMW 538
           IMTF +   FLF LL  Y  F  ++L  Y  + ++         + +K K +  LII+  
Sbjct: 59  IMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKTTETLIILSR 118

Query: 539 LVN 547
           ++N
Sbjct: 119 IMN 121


>AF321127-1|AAK01641.1|  200|Homo sapiens testis-expressed
           transmembrane-4 protein protein.
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 359 IMTFIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFLNLLELEIKHKCSGKLIIIMW 538
           IMTF +   FLF LL  Y  F  ++L  Y  + ++         + +K K +  LII+  
Sbjct: 59  IMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKTTETLIILSR 118

Query: 539 LVN 547
           ++N
Sbjct: 119 IMN 121


>AF237907-1|AAK37416.1|  200|Homo sapiens MS4A5 protein protein.
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 359 IMTFIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFLNLLELEIKHKCSGKLIIIMW 538
           IMTF +   FLF LL  Y  F  ++L  Y  + ++         + +K K +  LII+  
Sbjct: 59  IMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKTTETLIILSR 118

Query: 539 LVN 547
           ++N
Sbjct: 119 IMN 121


>AB013103-1|BAB18739.1|  200|Homo sapiens MS4A5 protein.
          Length = 200

 Score = 33.9 bits (74), Expect = 0.39
 Identities = 19/63 (30%), Positives = 31/63 (49%)
 Frame = +2

Query: 359 IMTFIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFLNLLELEIKHKCSGKLIIIMW 538
           IMTF +   FLF LL  Y  F  ++L  Y  + ++         + +K K +  LII+  
Sbjct: 59  IMTFSFGVIFLFTLLKPYPRFPFIFLSGYPFWGSVLFINSGAFLIAVKRKTTETLIILSR 118

Query: 539 LVN 547
           ++N
Sbjct: 119 IMN 121


>BC104794-1|AAI04795.1|  312|Homo sapiens olfactory receptor, family
           2, subfamily L, member 2 protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 368 FIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFL 478
           F++   FL  L+++  N  ++ L+   I+ + P+YFL
Sbjct: 25  FVFTLIFLIFLMALIGNLSMILLIFLDIHLHTPMYFL 61


>BC104792-1|AAI04793.1|  312|Homo sapiens olfactory receptor, family
           2, subfamily L, member 2 protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 368 FIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFL 478
           F++   FL  L+++  N  ++ L+   I+ + P+YFL
Sbjct: 25  FVFTLIFLIFLMALIGNLSMILLIFLDIHLHTPMYFL 61


>AB065597-1|BAC05825.1|  312|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 312

 Score = 29.9 bits (64), Expect = 6.3
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 368 FIYISSFLFNLLSMYSNFELVYLLIYSIY*NIPVYFL 478
           F++   FL  L+++  N  ++ L+   I+ + P+YFL
Sbjct: 25  FVFTLIFLIFLMALIGNLSMILLIFLDIHLHTPMYFL 61


>AB013076-1|BAA25794.1|  338|Homo sapiens loricrin protein.
          Length = 338

 Score = 29.5 bits (63), Expect = 8.4
 Identities = 15/40 (37%), Positives = 25/40 (62%)
 Frame = -1

Query: 191 NGGSSSKYLSTQRATPRTGCQPVNTVGETQPKRRDRIKER 72
           +GGS S Y+S+Q+ T +T C P  + G    +RR + ++R
Sbjct: 205 SGGSGSGYVSSQQVT-QTSCAPQPSYGGGVVRRRRQRRKR 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,008,728
Number of Sequences: 237096
Number of extensions: 1603434
Number of successful extensions: 2785
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2704
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2785
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5590411794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)