Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_O22
(450 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 24 0.67
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 23 1.5
AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cycl... 23 2.0
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 22 3.6
DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholi... 22 3.6
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.7
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 21 4.7
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 6.2
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 6.2
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 6.2
AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein. 21 6.2
AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin prepr... 21 8.2
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 24.2 bits (50), Expect = 0.67
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = +3
Query: 192 YRGPKKN*PKII 227
YRGPK+N PK++
Sbjct: 430 YRGPKQNKPKVL 441
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 23.0 bits (47), Expect = 1.5
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 326 LIGYNSVPVSLHLQVIYDCTVVK 394
L YN VP+++ V+Y +++
Sbjct: 691 LSSYNCVPINVQFSVLYGFVIIE 713
>AB193550-1|BAD66824.1| 699|Apis mellifera soluble guanylyl cyclase
alpha 1 subunit protein.
Length = 699
Score = 22.6 bits (46), Expect = 2.0
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +1
Query: 301 LIFMGNRHINRL*LCTGQFTFTSDI*LHSS 390
++F+ + +N L TG+ F SDI LH +
Sbjct: 389 ILFVSSPFLNGLEGLTGRGLFISDIPLHDA 418
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 21.8 bits (44), Expect = 3.6
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 302 LFLWVIDILIGYNSVPVSLHLQVIYD 379
LFLW+ + + + + L +YD
Sbjct: 516 LFLWIFTLAVVVGTAGIILQAPTLYD 541
>DQ026031-1|AAY87890.1| 601|Apis mellifera nicotinic acetylcholine
receptor alpha1subunit protein.
Length = 601
Score = 21.8 bits (44), Expect = 3.6
Identities = 8/28 (28%), Positives = 14/28 (50%)
Frame = +2
Query: 302 LFLWVIDILIGYNSVPVSLHLQVIYDCT 385
+FLW+ + +V + L +YD T
Sbjct: 549 IFLWIFTVACVLGTVLIILQAPSLYDTT 576
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 302 LFLWVIDILIGYNSVPVSLHLQVIYD 379
LFLW+ + + + + L +YD
Sbjct: 521 LFLWIFTLAVLVGTAGIILQAPTLYD 546
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 391 KVIAYCSINVIIHVIFLLI 447
KV SI + +HV FLL+
Sbjct: 275 KVTLSISILISLHVFFLLV 293
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 21.4 bits (43), Expect = 4.7
Identities = 7/26 (26%), Positives = 13/26 (50%)
Frame = +2
Query: 302 LFLWVIDILIGYNSVPVSLHLQVIYD 379
LFLW+ + + + + L +YD
Sbjct: 521 LFLWIFTLAVLVGTAGIILQAPTLYD 546
Score = 20.6 bits (41), Expect = 8.2
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +1
Query: 391 KVIAYCSINVIIHVIFLLI 447
KV SI + +HV FLL+
Sbjct: 275 KVTLSISILISLHVFFLLV 293
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 308 LWVIDILIGYNSVPVSLHLQVIYDCTVVKLL 400
LWV+D + N+ P+ + +D T +LL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKLLTFDLTTSQLL 165
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 308 LWVIDILIGYNSVPVSLHLQVIYDCTVVKLL 400
LWV+D + N+ P+ + +D T +LL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKLLTFDLTTSQLL 165
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 21.0 bits (42), Expect = 6.2
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +2
Query: 308 LWVIDILIGYNSVPVSLHLQVIYDCTVVKLL 400
LWV+D + N+ P+ + +D T +LL
Sbjct: 135 LWVLDSGLVNNTQPMCSPKLLTFDLTTSQLL 165
>AB194707-1|BAD69622.1| 247|Apis mellifera heme oxygenase protein.
Length = 247
Score = 21.0 bits (42), Expect = 6.2
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -1
Query: 297 IGKQWKADVNAR 262
+GK+WK ++N R
Sbjct: 90 LGKEWKKNLNLR 101
>AB201717-1|BAD90662.1| 107|Apis mellifera apime-corazonin
preprohormone protein.
Length = 107
Score = 20.6 bits (41), Expect = 8.2
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = -2
Query: 425 MITFILQYAITLLLC 381
+I FIL IT+++C
Sbjct: 7 LILFILSLTITIVMC 21
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,957
Number of Sequences: 438
Number of extensions: 2387
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11820384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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