Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O20
         (502 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    28   0.063
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    28   0.063
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      22   3.1  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   4.1  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   5.5  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   5.5  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   5.5  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   5.5  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   5.5  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   5.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   5.5  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    21   5.5  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          21   9.5  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      21   9.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   9.5  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 27.9 bits (59), Expect = 0.063
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 143 TLEVIHIEKPLWHRVKRVFGLLGFSHQTLPSISGFC 36
           T E  H ++ LW  VK+   ++G   + LPS    C
Sbjct: 796 TFEQFHNKELLWTSVKKALMIVGIRPERLPSFDDEC 831


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 27.9 bits (59), Expect = 0.063
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = -3

Query: 143 TLEVIHIEKPLWHRVKRVFGLLGFSHQTLPSISGFC 36
           T E  H ++ LW  VK+   ++G   + LPS    C
Sbjct: 834 TFEQFHNKELLWTSVKKALMIVGIRPERLPSFDDEC 869


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = -1

Query: 211 SARDQTSPRSKESISPPLR*NKKRLKSSILKNPFGIESNGS 89
           S   + S  +K  +    R  K++ KSS ++N    ESN S
Sbjct: 194 SQMTEPSSSTKSYVLEGPRNGKRKRKSSTIENESETESNAS 234


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +LYN K   L  RT
Sbjct: 11  EYKEKDRRYEKLYNEKEKLLEERT 34


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = +2

Query: 260 EFGTRVQRYPRLYNSKLIYLFNRT 331
           E+  + +RY +L+N K  +L  RT
Sbjct: 11  EYRKKDRRYEKLHNEKEKFLEERT 34


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 269 CRIRHEGSSGYLYWQYQME*CSG 201
           CR+  + +SG+ Y  +  E C G
Sbjct: 67  CRVCGDKASGFHYGVHSCEGCKG 89


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 400 GMCKAGFAGD 429
           GMCK G +GD
Sbjct: 130 GMCKEGISGD 139


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 163 EAKSIPYFWEKFDPEHYSIWYCQYKY 240
           + K+   + E   P +YS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 163 EAKSIPYFWEKFDPEHYSIWYCQYKY 240
           + K+   + E   P +YS WY  + Y
Sbjct: 189 DTKTSGKYKEYIIPANYSGWYLNHDY 214


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +3

Query: 54  GKSLMRKPKESKDPFDSMPKGFF 122
           G +++R    S +  DS+P+G F
Sbjct: 259 GLTVLRTFNASYNSLDSLPEGLF 281


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,745
Number of Sequences: 438
Number of extensions: 3341
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)