Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O18
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    24   0.93 
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    24   0.93 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    24   0.93 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    24   0.93 
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   2.8  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.7  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   4.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.5  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   6.5  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    21   6.5  

>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 264 NNNNMAHSKVNKKVVGAAVDLPECPV 341
           NNNN  ++  NKK+    +++ + PV
Sbjct: 99  NNNNYNNNNYNKKLYYNIINIEQIPV 124


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 264 NNNNMAHSKVNKKVVGAAVDLPECPV 341
           NNNN  ++  NKK+    +++ + PV
Sbjct: 99  NNNNYNNNNYNKKLYYNIINIEQIPV 124


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 143 LVLLISPQDQQGLLQFARRENVITTF 66
           +VL    +D +G+L+ ARR N+   F
Sbjct: 200 VVLFTRAEDARGILEAARRSNLSQPF 225


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 23.8 bits (49), Expect = 0.93
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -2

Query: 143 LVLLISPQDQQGLLQFARRENVITTF 66
           +VL    +D +G+L+ ARR N+   F
Sbjct: 290 VVLFTRAEDARGILEAARRSNLSQPF 315


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 YCNLHAERM*SLRLCTNLQQYYTA 35
           YC  H +   ++++   L Q YTA
Sbjct: 423 YCAAHTDSSGAMKIVNMLNQLYTA 446


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -3

Query: 106 YCNLHAERM*SLRLCTNLQQYYTA 35
           YC  H +   ++++   L Q YTA
Sbjct: 423 YCAAHTDSSGAVKIVNMLNQLYTA 446


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 333 CPVCMETMSAPIFQCQSGHSLCNSC 407
           C +C+++M+A I       +  NSC
Sbjct: 355 CCLCLDSMNAVIRNFNESENRRNSC 379


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 11/37 (29%), Positives = 20/37 (54%)
 Frame = -3

Query: 112 KDYCNLHAERM*SLRLCTNLQQYYTASKTGDVKVRLV 2
           +DYCN+ A  +    L + L  ++   +  DVK+ L+
Sbjct: 359 EDYCNIVATHLVCGILGSILVPFFYVQEDDDVKLVLL 395


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = -2

Query: 128 SPQDQQGLLQFARRENVITT 69
           SPQ  QGLLQ A   N  TT
Sbjct: 761 SPQGSQGLLQCA-TSNYSTT 779


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -1

Query: 273 CCCSLFSKTRYQIK 232
           CC   F+ T+YQI+
Sbjct: 605 CCWHCFNCTQYQIR 618


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,404
Number of Sequences: 438
Number of extensions: 3115
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)