Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O15
         (602 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           23   2.3  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           23   2.3  
AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protei...    23   3.0  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              22   4.0  
AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.              22   5.3  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   9.3  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    21   9.3  

>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 350 KPPTKEDHVTIEPSESYIDDN 412
           KPP  +D V +EPS  + + N
Sbjct: 70  KPPGPKDLVYLEPSPPFCEKN 90


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 5/23 (21%), Positives = 16/23 (69%)
 Frame = -2

Query: 211 NSFYRSFSNDCNIIFYNTYRVKR 143
           N++  +++N+C  ++YN   +++
Sbjct: 341 NNYNNNYNNNCKKLYYNIINIEQ 363


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +2

Query: 350 KPPTKEDHVTIEPSESYIDDN 412
           KPP  +D V +EPS  + + N
Sbjct: 71  KPPGPKDLVYLEPSPPFCEKN 91


>AF469010-1|AAL93136.1|  678|Apis mellifera cGMP-dependent protein
           kinase foraging protein.
          Length = 678

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +2

Query: 548 RVRTTVETTTIDEFPDSS 601
           RV+   +TT  DE+P  S
Sbjct: 646 RVQNATDTTNFDEYPPDS 663


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 4.0
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 8/61 (13%)
 Frame = +2

Query: 278 EDEYPDGTVITKKSEKVSI-ADVFLKPPTKEDH-------VTIEPSESYIDDNEIVEDTT 433
           ED++ +G +I  ++EKV + ++  +K     D        V  E +E Y+D+NE+ +  T
Sbjct: 44  EDDFRNG-IIDVENEKVQLFSECLIKKFNAYDDGGNFNEVVVREIAEIYLDENEVNKLIT 102

Query: 434 E 436
           E
Sbjct: 103 E 103


>AB023025-1|BAA74592.1|  133|Apis mellifera actin protein.
          Length = 133

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 284 EYPDGTVITKKSEKVSIADVFLKP 355
           E PDG VIT  +E+    +   +P
Sbjct: 16  ELPDGQVITIGNERFRCPEALFQP 39


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 5/17 (29%), Positives = 13/17 (76%)
 Frame = -2

Query: 211 NSFYRSFSNDCNIIFYN 161
           N++  +++N+C  ++YN
Sbjct: 94  NNYKYNYNNNCKKLYYN 110


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = -3

Query: 285 SSSITVLIIVFIFFNFSVRF 226
           +S I +   +F++FN  VRF
Sbjct: 14  TSFILINYFIFLYFNSLVRF 33


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,000
Number of Sequences: 438
Number of extensions: 2934
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)