Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_O14
(639 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces pomb... 54 2e-08
SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 52 9e-08
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 45 1e-05
SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces po... 41 1e-04
SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces p... 40 3e-04
SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces pomb... 39 5e-04
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 39 5e-04
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 39 7e-04
SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces... 37 0.002
SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 36 0.005
SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr ... 36 0.007
SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces pom... 34 0.015
SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces po... 34 0.015
SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces pomb... 34 0.020
SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces po... 31 0.14
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 31 0.19
SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated |Schizosac... 28 0.99
SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 27 2.3
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 27 2.3
SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyce... 27 3.0
SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit Ssr1|Schizosa... 26 4.0
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 4.0
SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces pom... 26 5.3
SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces p... 26 5.3
SPBP35G2.11c |||transcription related zf-ZZ type zinc finger pro... 26 5.3
SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase Gmh1|Schizosa... 25 7.0
SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|ch... 25 7.0
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 25 7.0
>SPCC736.13 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 339
Score = 54.0 bits (124), Expect = 2e-08
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 6/129 (4%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPA--FHVLDV 205
VA+VTGS+ G+G+ L +K VYL R+E + + +K+++D F LD+
Sbjct: 44 VALVTGSSGGIGYVTALELARK-GAKVYLAGRNEEKYQKVMKQIHDEVRHSKIRFLRLDL 102
Query: 206 SDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVAK----RNIDVNYKSLLTI 373
D ESV Q A K + +LVNNA I+ P +E+ K I NY S
Sbjct: 103 LDFESVYQAAESFIAKEEKLHILVNNAGIMN-----PPFELTKDGYELQIQTNYLSHYLF 157
Query: 374 EEYLYPLLR 400
E L P LR
Sbjct: 158 TELLLPTLR 166
>SPCC162.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 292
Score = 51.6 bits (118), Expect = 9e-08
Identities = 43/137 (31%), Positives = 72/137 (52%), Gaps = 6/137 (4%)
Frame = +2
Query: 38 IVTGSNKGLGFAIVK-GLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPAFHVLDVSDK 214
++TGS+KGLG+A+VK GL Q + A D + +E K L LDV+D
Sbjct: 9 LITGSSKGLGYALVKVGLAQGYNVIACSRAPDTIT-IEHSKLLK--------LKLDVTDV 59
Query: 215 ESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVAK--RNIDVNYKSLLTIEEYLY 388
+SV+ K + G +D+++NNA E + SY + + R ++VN+ + I +
Sbjct: 60 KSVETAFKDAKRRFGNVDIVINNAGYGLVGE-FESYNIEEMHRQMNVNFWGVAYITKEAL 118
Query: 389 PLLRD---GARVVNVSS 430
L+R+ G R++ +SS
Sbjct: 119 NLMRESGKGGRILQISS 135
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 44.8 bits (101), Expect = 1e-05
Identities = 36/146 (24%), Positives = 65/146 (44%), Gaps = 4/146 (2%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPAFHVLDVSD 211
V + G N+G+G ++VK L + TV+ +AR E + + LDV+
Sbjct: 7 VYFIAGGNRGIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKTVE-LDVTS 65
Query: 212 KESVKQFANYIKNKHGGIDVLVNNAAILE--WDEVYPSYEVAKRNIDVNYKSLLTIEEYL 385
++S + A + GIDVL N+ I + + + EV + N + + +
Sbjct: 66 QQSANEAAQSVAKAVDGIDVLWLNSGICQSYYTVMEAPEEVWNAHYQTNVLGPIHVFKAF 125
Query: 386 YPLL--RDGARVVNVSSGCAHLSNLK 457
YPLL + +V+ SS C + + +
Sbjct: 126 YPLLTKKKTRQVIFTSSECGSMGDFR 151
>SPCC663.06c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 41.1 bits (92), Expect = 1e-04
Identities = 35/130 (26%), Positives = 62/130 (47%), Gaps = 5/130 (3%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPA-FHV--LD 202
+ + G N+G+G ++VK L + EGTV + R EA +L + + H+ LD
Sbjct: 7 IYFIAGGNRGIGLSLVKELSNR-EGTVVFAS---ARKPEAATELQEWSKSHSNVHIIKLD 62
Query: 203 VSDKESVKQFANYIKNKHGGIDVL-VNNAAILEWDEVYPS-YEVAKRNIDVNYKSLLTIE 376
+S ES + A + G +DVL VN+ ++ V + +V + N + +
Sbjct: 63 ISSLESANEAAQEVAKAVGKVDVLWVNSGIFHSFNTVLNTPDDVWNSHYKTNVLGPIHVY 122
Query: 377 EYLYPLLRDG 406
+ YPL++ G
Sbjct: 123 QAFYPLVKKG 132
>SPCC24B10.20 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 254
Score = 39.9 bits (89), Expect = 3e-04
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPA-FHV--LD 202
V ++ G N+G+G ++VK L K TV+ +A RG + +L D + H+ LD
Sbjct: 8 VYVIVGGNRGIGLSLVKELSNKEGVTVFASA----RGPGSASELKDWSKTHSNVHIIKLD 63
Query: 203 VSDKESVKQFANYIKNKHGGIDVL-VNNAAILEWDEVY-PSYEVAKRNIDVNYKSLLTIE 376
V+ S K A ++ IDVL VN+ + V S E+ + N + +
Sbjct: 64 VTSLRSAKDAAMQVEKVVKCIDVLWVNSGISKSFQPVLKTSDELWMSHYQTNVLGPIHVY 123
Query: 377 EYLYPLLRDG--ARVVNVSSGCAHLSNLKNKKWIA 475
+ Y LL++G +V SS A + ++ + A
Sbjct: 124 QAFYHLLKEGKLKNIVFTSSMAACMGGVRPNTYSA 158
>SPBC30D10.05c |||sepiapterin reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 247
Score = 39.1 bits (87), Expect = 5e-04
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 3/141 (2%)
Frame = +2
Query: 26 EGVAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPAFHVLDV 205
E V ++TGS+KG+G A + L +K V +R LE + N + HV
Sbjct: 6 EKVILLTGSSKGIGLATAEALQKK--AKVIAVSRSLTPELETLLIQNPDSFV---HVKGD 60
Query: 206 SDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVA--KRNIDVNYKSLLTIEE 379
+ IK K G +D ++ NA +LE ++ ++ D+N+ S++ +
Sbjct: 61 VTEVGKASIETAIK-KFGKLDSVILNAGVLEPIAKIADADINEWRKLFDINFFSVVETVK 119
Query: 380 YLYPLLR-DGARVVNVSSGCA 439
Y P LR +V VSSG A
Sbjct: 120 YAIPHLRKTKGTIVIVSSGAA 140
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 39.1 bits (87), Expect = 5e-04
Identities = 36/142 (25%), Positives = 66/142 (46%), Gaps = 6/142 (4%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPA-FHV--LD 202
+ + G N+G+G ++VK L + V+ +AR A KL + + H+ LD
Sbjct: 7 IYFIAGGNRGIGLSLVKELSNRKGTVVFASARKP----GAATKLQEWSKSHSNVHIIKLD 62
Query: 203 VSDKESVKQFANYIKNKHGGIDVL-VNNAAILEWDEVYPS-YEVAKRNIDVNYKSLLTIE 376
VS ES + A + +DVL VN+A + V + +V + N + +
Sbjct: 63 VSSLESANEAAQEVTKVVDAVDVLWVNSAVFHSFGPVVNTPDDVWNSHYKTNVLGPIHVY 122
Query: 377 EYLYPLLRDG-ARVVNVSSGCA 439
+ YPL++ G ++++ +S A
Sbjct: 123 QAFYPLIKKGRSKIIVFTSSLA 144
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 38.7 bits (86), Expect = 7e-04
Identities = 34/138 (24%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = +2
Query: 38 IVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLN---DIGLMPAFHVLDVS 208
++TG++ G+G + + + + + L AR E K+L ++ ++P LDVS
Sbjct: 10 LITGASSGIGKSTAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPL--KLDVS 67
Query: 209 DKESVKQFANYIKNKHGGIDVLVNNAAI-LEWDEVYP-SYEVAKRNIDVNYKSLLTIEEY 382
D +S+ + + IDVL+NNA + L D+V + + A I N ++ +
Sbjct: 68 DLKSIPGVIESLPKEFADIDVLINNAGLALGTDKVIDLNIDDAVTMITTNVLGMMAMTRA 127
Query: 383 LYPLL--RDGARVVNVSS 430
+ P+ ++ ++NV S
Sbjct: 128 VLPIFYSKNKGDILNVGS 145
>SPBC1709.07 |erg27||3-keto sterol reductase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 338
Score = 37.1 bits (82), Expect = 0.002
Identities = 31/103 (30%), Positives = 48/103 (46%), Gaps = 13/103 (12%)
Frame = +2
Query: 35 AIVTGSNKGLGFAIVKGLCQKFEG---------TVYLTARDEMRGLEAVKKLN----DIG 175
A++TGSN GLGF I L Q ++ TV LT R + +A ++L D
Sbjct: 7 ALITGSNSGLGFGIATRLLQFYQPRLQDEPEVFTVILTCRSREKAEDACRRLKEFFPDRK 66
Query: 176 LMPAFHVLDVSDKESVKQFANYIKNKHGGIDVLVNNAAILEWD 304
+ + +LD+S+ SV+ I + +D + NA WD
Sbjct: 67 IRLEYVLLDLSNMASVEAAVQDIATRFPKLDFVYLNAG--AWD 107
>SPAC4H3.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 286
Score = 35.9 bits (79), Expect = 0.005
Identities = 36/149 (24%), Positives = 64/149 (42%), Gaps = 6/149 (4%)
Frame = +2
Query: 2 HEGAHKMPEGVAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLM 181
H G+ K+ E ++TG + G+G A ++ V +E E + L +
Sbjct: 34 HVGSGKLAEKKTLLTGGDSGIGKAAAVMFAREGSDLVISCLPEERDDAEVTRDLIEREGR 93
Query: 182 PAFHVLDVSDK-ESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYE-VAKRNIDVNY 355
+ DK ++ + ++ K G IDVLVNN A + +V S E + D+ +
Sbjct: 94 NCWIWEGKLDKSDNCRDLVDFALKKLGWIDVLVNNIA---YQQVAQSIEDIDDEQWDLTF 150
Query: 356 K----SLLTIEEYLYPLLRDGARVVNVSS 430
K S + + ++ G+ +VN SS
Sbjct: 151 KTNIFSFFWVTKAAISHMKSGSSIVNCSS 179
>SPAC8E11.10 |||sorbose reductase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 255
Score = 35.5 bits (78), Expect = 0.007
Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 38 IVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLND-IGLMPAFHVLDVSDK 214
++TG + G+GF+I K L R++ + LE +L D G+ + + ++
Sbjct: 13 LITGGSGGIGFSIAKAFAAAGSNVGLLYGRNK-KALEYAAELRDKHGVQAKAYSCPIENR 71
Query: 215 ESVKQFANYIKNKHGG-IDVLVNNAAI 292
+V + N + GG +DV++ NA I
Sbjct: 72 SAVIETTNQAVEELGGRLDVMIANAGI 98
>SPAC977.08 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 236
Score = 34.3 bits (75), Expect = 0.015
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 197 LDVSDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVAKRNI-DVNYKSLLTI 373
LDV++ S+K+ + G IDVL+NNA + + + E NI + N L +
Sbjct: 21 LDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEV 80
Query: 374 EEYLYPLLRD--GARVVNVSS 430
+ + P+ R ++NVSS
Sbjct: 81 IKAITPIFRSQHNGMIINVSS 101
>SPBC1348.09 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 236
Score = 34.3 bits (75), Expect = 0.015
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 3/81 (3%)
Frame = +2
Query: 197 LDVSDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVAKRNI-DVNYKSLLTI 373
LDV++ S+K+ + G IDVL+NNA + + + E NI + N L +
Sbjct: 21 LDVNNFSSIKKSVEKAISHFGRIDVLLNNAGYSVYSPLESTTEEQIHNIFNTNVFGALEV 80
Query: 374 EEYLYPLLRD--GARVVNVSS 430
+ + P+ R ++NVSS
Sbjct: 81 IKAITPIFRSQHNGMIINVSS 101
>SPAC922.06 |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 258
Score = 33.9 bits (74), Expect = 0.020
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 7/145 (4%)
Frame = +2
Query: 32 VAIVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAV--KKLNDIGLMPAFHVLDV 205
V ++TG+ G+G K LC+ F D + G++ V K+ D L A DV
Sbjct: 7 VVLITGAAGGIG----KVLCKMFT-----ELGDRVAGIDIVDPSKVQDAAL--ALQA-DV 54
Query: 206 SDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYP--SYEVAKRNIDVNYKSLLTIEE 379
S + ++ + G IDVL+NNA + + D + S+E ++ + + +
Sbjct: 55 SKADQIETAIEKVIQTLGPIDVLINNAGLAD-DTPFEQLSHESWDHDVSLVLRGNYLTQR 113
Query: 380 YLYPLLR---DGARVVNVSSGCAHL 445
Y+ P + G +VN+ S H+
Sbjct: 114 YVIPHMAKQGKGGSIVNIGSVNGHI 138
>SPCC1739.08c |||short chain dehydrogenase|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 261
Score = 31.1 bits (67), Expect = 0.14
Identities = 30/118 (25%), Positives = 53/118 (44%), Gaps = 2/118 (1%)
Frame = +2
Query: 38 IVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPAFHVLDVSDKE 217
+V G+ KG+GF+I Q G V +T +A K + G+ +D+S +
Sbjct: 25 VVFGAAKGIGFSIATAFAQA-GGNVIITYLTTDPTEKAKKLAEETGVQVHTLKIDISRSD 83
Query: 218 SVKQFANYIKNKHGGIDVLVNNAAILEWDEVY--PSYEVAKRNIDVNYKSLLTIEEYL 385
+V+ I+ I V+V NA + V P +E K +++N S+ + Y+
Sbjct: 84 TVEAGVEEIQKIFKEIHVVVANAGMPFRRSVLDSPPHEFEK-VMNINTNSVYRVAYYM 140
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 30.7 bits (66), Expect = 0.19
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 4/66 (6%)
Frame = +2
Query: 38 IVTGSNKGLGFAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGL----MPAFHVLDV 205
+VTG ++GLG AI K L + V + AR + EAV +L+D + +F +D+
Sbjct: 26 LVTGGSQGLGKAIAKELVLR-GANVTIVARTVTKLQEAVAELSDSKIHEDQQVSFESVDL 84
Query: 206 SDKESV 223
+ ESV
Sbjct: 85 TSYESV 90
>SPCC1235.07 |fta7|sma7, cnl3|Sim4 and Mal2 associated
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 244
Score = 28.3 bits (60), Expect = 0.99
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +2
Query: 317 SYEVAKRNIDVNYKSLLTIEEYLYPLLRDGARV 415
SYE K+N+ +N L ++ L+P L+ G ++
Sbjct: 125 SYEEMKQNMAINNSRLADLKSKLHPYLKKGLKI 157
>SPBC582.04c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 601
Score = 27.1 bits (57), Expect = 2.3
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = -2
Query: 611 WTLYTQHVYPHQRNHFYQMYRFSHSPNNRQRIY 513
W LY ++ +P Q + FY+ + + S ++ RIY
Sbjct: 443 WNLYIEYGHPTQNSTFYKEFISNISMSDDGRIY 475
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 27.1 bits (57), Expect = 2.3
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -1
Query: 570 SFLSNVPFFTLSK*SSTNLLICSTVKSGFSNVA 472
+ LSN P FT S SST + +T+ G +N++
Sbjct: 106 NLLSNTPSFTTSHSSSTTFVPPATMGGGLNNLS 138
>SPBC21D10.09c |||ubiquitin-protein ligase E3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1610
Score = 26.6 bits (56), Expect = 3.0
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 290 ILEWDEVYPSYEVAKRNIDVNYKSLLTIEEYLYPLLRDGARVVNVS 427
+L WD ++ +E NI ++ + L + L PLL ++N+S
Sbjct: 1325 LLVWDLIFYHFEETTYNIKLSIINQLHAMDLLRPLLNTLVEILNLS 1370
>SPAC17G6.10 |ssr1||SWI/SNF and RSC complex subunit
Ssr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 26.2 bits (55), Expect = 4.0
Identities = 10/28 (35%), Positives = 12/28 (42%)
Frame = -3
Query: 637 HCYCCKSDFGHSILSMFTLISEIISIKC 554
HCYCC + F S T + I C
Sbjct: 236 HCYCCGNKFNESYYQSQTAQKYNVCISC 263
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 4.0
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +2
Query: 68 FAIVKGLCQKFEGTVYLTARDEMRGLEAVKKLNDIGLMPAFHVLDVSDKESV 223
+ I+K + + GTVYL+ ++ + A+K L + ++ V +V + +V
Sbjct: 564 YEIIKPISKGTFGTVYLSRKNTTGEIYAIKVLRKVDMISKNQVANVKAERAV 615
>SPBC1347.05c |||DNAJ domain protein Scj1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 25.8 bits (54), Expect = 5.3
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = +2
Query: 185 AFHVLDVSDKESVKQFANYIKNKHGGIDVLVNNAAILEWDEVYPSYEVAKRNIDVN 352
A V+ + E VK I N H G + +A +EW+ +P K D+N
Sbjct: 313 AGEVVHPGETERVKNQGMPIYNLHKGKTTSAHGSAYIEWEVKFPKKLKGKFLKDLN 368
>SPBC21C3.08c |||ornithine aminotransferase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 438
Score = 25.8 bits (54), Expect = 5.3
Identities = 11/27 (40%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Frame = +2
Query: 95 KFEGTVYLTARDEMRGLEAVKK-LNDI 172
+F + +T D M+G+E +KK LND+
Sbjct: 398 RFSPPLVITEEDLMKGIEVIKKSLNDL 424
>SPBP35G2.11c |||transcription related zf-ZZ type zinc finger
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 397
Score = 25.8 bits (54), Expect = 5.3
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 206 LRLEHEMLASILYHSISSRPRVLSFHLLLLNKQYL 102
LRL E+ AS L+ S +P+VL+F L+ L
Sbjct: 251 LRLTREISASPLHLSKPEKPKVLNFDFKLVEDSIL 285
>SPAC5H10.11 |gmh1||alpha-1,2-galactosyltransferase
Gmh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 25.4 bits (53), Expect = 7.0
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = -3
Query: 340 IPFSNFITGVYFVPFKNSSVIDENVDAPVLIFDVICKLFNTFFI 209
I F+ F G+YF+P SV D + P L ++ + F I
Sbjct: 22 IVFTFFAFGLYFIPHDEISVFDFKL--PALQYETTVTSLDNFLI 63
>SPAC1A6.06c |meu31||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 185
Score = 25.4 bits (53), Expect = 7.0
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = -1
Query: 612 LDTLYSACLPSSAKSFLSNVPFFTLSK*SSTNLLICS--TVKSGFSNVAIHFLFFKFDKC 439
+D +S CL S + S P+ ++ N++ CS T K F VA ++ F C
Sbjct: 81 IDAFFSMCLRSCTIIYFSMNPYMLCEILNARNVISCSLNTQKFFFIIVAASNVYSIFQLC 140
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 25.4 bits (53), Expect = 7.0
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = -2
Query: 608 TLYTQHVYPHQRNHFYQMYRFSHSPNNRQRI 516
+L + +Y H H + HSP+NR+R+
Sbjct: 78 SLDLRSMYMHGYGHLDSSFSSQHSPDNRKRM 108
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,455,568
Number of Sequences: 5004
Number of extensions: 50198
Number of successful extensions: 206
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 200
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 285732116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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