Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O12
         (478 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    22   3.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.1  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    21   6.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    21   6.8  

>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.8 bits (44), Expect = 3.9
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 111 KFINFSKFFF 82
           K+INF +FFF
Sbjct: 8   KYINFDRFFF 17


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.4 bits (43), Expect = 5.1
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 232 VQNIHTLYIVECTRHHKPKNSL 167
           ++ +HTL IVE      P NSL
Sbjct: 146 LRELHTLEIVESNVQALPVNSL 167


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 339 IAIF*KNGMIDDFLRKLTSNFHIV 410
           I  F +NG +D FLR     F ++
Sbjct: 712 ITEFMENGSLDTFLRANDGKFQVL 735


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 21.0 bits (42), Expect = 6.8
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 110 NLLISPNFFSIQTSNNTLFTF 48
           N  ++PN F +   NNT   F
Sbjct: 327 NTELNPNTFILVAENNTTMVF 347


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,853
Number of Sequences: 438
Number of extensions: 1676
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12928545
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)