Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O04
         (102 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p pro...    33   0.053
AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine...    33   0.053
AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA ...    33   0.053

>BT011121-1|AAR82788.1|  408|Drosophila melanogaster LD13390p
           protein.
          Length = 408

 Score = 33.1 bits (72), Expect = 0.053
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  WNMPFAFCTREKQP 51
           W MPFAFCTREK P
Sbjct: 144 WTMPFAFCTREKFP 157



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +2

Query: 5   EDGTCPSLSARGRNNPVCEFAESAEEGPTTR 97
           E  T P         P CEFAE AE GPTT+
Sbjct: 142 EAWTMPFAFCTREKFPWCEFAEEAENGPTTK 172


>AF333187-1|AAK60520.1|  386|Drosophila melanogaster beta-alanine
           synthase protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.053
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  WNMPFAFCTREKQP 51
           W MPFAFCTREK P
Sbjct: 122 WTMPFAFCTREKFP 135



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +2

Query: 5   EDGTCPSLSARGRNNPVCEFAESAEEGPTTR 97
           E  T P         P CEFAE AE GPTT+
Sbjct: 120 EAWTMPFAFCTREKFPWCEFAEEAENGPTTK 150


>AE014297-636|AAF54141.2|  386|Drosophila melanogaster CG3027-PA
           protein.
          Length = 386

 Score = 33.1 bits (72), Expect = 0.053
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 10  WNMPFAFCTREKQP 51
           W MPFAFCTREK P
Sbjct: 122 WTMPFAFCTREKFP 135



 Score = 31.5 bits (68), Expect = 0.16
 Identities = 15/31 (48%), Positives = 16/31 (51%)
 Frame = +2

Query: 5   EDGTCPSLSARGRNNPVCEFAESAEEGPTTR 97
           E  T P         P CEFAE AE GPTT+
Sbjct: 120 EAWTMPFAFCTREKFPWCEFAEEAENGPTTK 150


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,242,589
Number of Sequences: 53049
Number of extensions: 54726
Number of successful extensions: 207
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 204
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 207
length of database: 24,988,368
effective HSP length: 15
effective length of database: 24,192,633
effective search space used: 435467394
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)