Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O04
         (102 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   1.8  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   1.8  
AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin prot...    20   2.4  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      18   9.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                18   9.9  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 76  GRFSEFAHRVVSPACRKRRACSI 8
           G F     + +S ACR+ ++C I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 76  GRFSEFAHRVVSPACRKRRACSI 8
           G F     + +S ACR+ ++C I
Sbjct: 132 GFFKRTVRKDLSYACREEKSCII 154


>AB073998-1|BAC76402.1|  339|Apis mellifera preprotachykinin
           protein.
          Length = 339

 Score = 20.2 bits (40), Expect = 2.4
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = +2

Query: 26  LSARGRNNPVCEF 64
           L ARG+ NP  EF
Sbjct: 309 LGARGKKNPRWEF 321


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 7/9 (77%), Positives = 7/9 (77%)
 Frame = -3

Query: 58 AHRVVSPAC 32
          AHRVV  AC
Sbjct: 45 AHRVVLSAC 53


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 18.2 bits (35), Expect = 9.9
 Identities = 5/9 (55%), Positives = 9/9 (100%)
 Frame = -3

Query: 46  VSPACRKRR 20
           V+P+CR++R
Sbjct: 97  VTPSCRRQR 105


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,061
Number of Sequences: 438
Number of extensions: 344
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 14
effective length of database: 140,211
effective search space used:  2664009
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)