Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O03
         (383 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC000981-1|AAH00981.1|  753|Homo sapiens spermatogenesis associa...    33   0.31 
AK023232-1|BAB14482.1|  620|Homo sapiens protein ( Homo sapiens ...    33   0.31 
AK096380-1|BAC04773.1|  600|Homo sapiens protein ( Homo sapiens ...    29   5.1  

>BC000981-1|AAH00981.1|  753|Homo sapiens spermatogenesis associated
           5-like 1 protein.
          Length = 753

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -2

Query: 310 LDWTIVNGYVDIKLPNKASTKSEYAWVLKFTLK*MRLTLTQPR 182
           +DW  + G  D+KL  K S +    W LKF  + +R+ LTQP+
Sbjct: 461 VDWEEIGGLEDVKLKLKQSIE----WPLKFPWEFVRMGLTQPK 499


>AK023232-1|BAB14482.1|  620|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13170 fis, clone NT2RP3003809, weakly similar to
           SAV PROTEIN. ).
          Length = 620

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 17/43 (39%), Positives = 25/43 (58%)
 Frame = -2

Query: 310 LDWTIVNGYVDIKLPNKASTKSEYAWVLKFTLK*MRLTLTQPR 182
           +DW  + G  D+KL  K S +    W LKF  + +R+ LTQP+
Sbjct: 461 VDWEEIGGLEDVKLKLKQSIE----WPLKFPWEFVRMGLTQPK 499


>AK096380-1|BAC04773.1|  600|Homo sapiens protein ( Homo sapiens
           cDNA FLJ39061 fis, clone NT2RP7013764. ).
          Length = 600

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 12/39 (30%), Positives = 19/39 (48%)
 Frame = -2

Query: 343 KVEMLGNEGDYLDWTIVNGYVDIKLPNKASTKSEYAWVL 227
           K+E+     DYL+W     YV    P   +  S+++W L
Sbjct: 20  KLEVYFEPEDYLNWRSPEDYVPASKPQDKNNASQHSWSL 58


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,442,500
Number of Sequences: 237096
Number of extensions: 876822
Number of successful extensions: 1340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1295
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1338
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2583773550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)