Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O02
         (574 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY070648-1|AAL48119.1|  109|Drosophila melanogaster RH03295p pro...   126   2e-29
AE013599-3625|AAF47024.1|  109|Drosophila melanogaster CG17280-P...   126   2e-29
BT023629-1|AAY85029.1|   94|Drosophila melanogaster IP05686p pro...    97   2e-20
AE013599-2139|AAM70935.1|   94|Drosophila melanogaster CG30093-P...    97   2e-20
AE014296-3083|AAF49209.2|  289|Drosophila melanogaster CG14077-P...    62   4e-10
BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p pro...    29   4.5  
AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p pro...    29   4.5  
AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-P...    29   4.5  
BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p pro...    28   7.8  
AY113365-1|AAM29370.1|  366|Drosophila melanogaster LD23375p pro...    28   7.8  
AY060223-1|AAL25262.1|  312|Drosophila melanogaster GH01163p pro...    28   7.8  
AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec...    28   7.8  
AE014297-1256|AAF54604.1|  366|Drosophila melanogaster CG6672-PA...    28   7.8  
AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,...    28   7.8  
AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,...    28   7.8  

>AY070648-1|AAL48119.1|  109|Drosophila melanogaster RH03295p
           protein.
          Length = 109

 Score =  126 bits (304), Expect = 2e-29
 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +2

Query: 110 YKLWKKMSFFVAFPAIGLGMLNAYLAHQE-HQHERPPFVAYDYMRIRSKRFPWGDGQKSL 286
           YK+WK++SFFVA PA+GL MLNAYL HQE H   R  FV YDY+R R KRFPWG+GQKSL
Sbjct: 35  YKVWKRLSFFVAVPAVGLCMLNAYLKHQEEHDKPRQEFVKYDYLRRREKRFPWGEGQKSL 94

Query: 287 FHNPHVNALPSGYE 328
           FHNPHVNALP GYE
Sbjct: 95  FHNPHVNALPDGYE 108


>AE013599-3625|AAF47024.1|  109|Drosophila melanogaster CG17280-PA
           protein.
          Length = 109

 Score =  126 bits (304), Expect = 2e-29
 Identities = 55/74 (74%), Positives = 61/74 (82%), Gaps = 1/74 (1%)
 Frame = +2

Query: 110 YKLWKKMSFFVAFPAIGLGMLNAYLAHQE-HQHERPPFVAYDYMRIRSKRFPWGDGQKSL 286
           YK+WK++SFFVA PA+GL MLNAYL HQE H   R  FV YDY+R R KRFPWG+GQKSL
Sbjct: 35  YKVWKRLSFFVAVPAVGLCMLNAYLKHQEEHDKPRQEFVKYDYLRRREKRFPWGEGQKSL 94

Query: 287 FHNPHVNALPSGYE 328
           FHNPHVNALP GYE
Sbjct: 95  FHNPHVNALPDGYE 108


>BT023629-1|AAY85029.1|   94|Drosophila melanogaster IP05686p
           protein.
          Length = 94

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 53/73 (72%)
 Frame = +2

Query: 116 LWKKMSFFVAFPAIGLGMLNAYLAHQEHQHERPPFVAYDYMRIRSKRFPWGDGQKSLFHN 295
           LWK+++F +A PAI L   NA+  H+    ER PF  Y+Y+R R+KRFPWGDG +SLFHN
Sbjct: 19  LWKRVTFLLALPAIVLCAANAFTGHKHV--EREPFAKYEYLRRRTKRFPWGDGNRSLFHN 76

Query: 296 PHVNALPSGYEDD 334
             VNALP GYED+
Sbjct: 77  AEVNALPEGYEDE 89


>AE013599-2139|AAM70935.1|   94|Drosophila melanogaster CG30093-PA
           protein.
          Length = 94

 Score = 96.7 bits (230), Expect = 2e-20
 Identities = 42/73 (57%), Positives = 53/73 (72%)
 Frame = +2

Query: 116 LWKKMSFFVAFPAIGLGMLNAYLAHQEHQHERPPFVAYDYMRIRSKRFPWGDGQKSLFHN 295
           LWK+++F +A PAI L   NA+  H+    ER PF  Y+Y+R R+KRFPWGDG +SLFHN
Sbjct: 19  LWKRVTFLLALPAIVLCAANAFTGHKHV--EREPFAKYEYLRRRTKRFPWGDGNRSLFHN 76

Query: 296 PHVNALPSGYEDD 334
             VNALP GYED+
Sbjct: 77  AEVNALPEGYEDE 89


>AE014296-3083|AAF49209.2|  289|Drosophila melanogaster CG14077-PA
           protein.
          Length = 289

 Score = 62.5 bits (145), Expect = 4e-10
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 113 KLWKKMSFFVAFPAIGLGMLNAYLAHQEHQHERPPFVAYDYMRIRSKRFPWGDGQKSLFH 292
           KLW+K+S F   P I +  L  +    E   ER  F  Y++M  R+KR+ + DG ++ FH
Sbjct: 159 KLWQKISLFGVLPMIAILTLLVFSTRSEE--ERLEFKNYEHMYRRTKRYWFKDGNRTAFH 216

Query: 293 NPHVNAL-PSGYEDD 334
           N H NAL P+GYED+
Sbjct: 217 NSHFNALPPAGYEDE 231


>BT024277-1|ABC86339.1| 1455|Drosophila melanogaster IP14411p
           protein.
          Length = 1455

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
 Frame = -3

Query: 302 HGGCGREISGHHPRGNAYYECACSHRQ--------QKVVVHAGVLDGLSKH*AYPDL*QG 147
           H    R    H P+  A ++C   HR+          + VHAG  D ++     PD+ Q 
Sbjct: 715 HKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYINNQPVVPDVNQE 774

Query: 146 MLQRRTSSSTAC 111
           M+  R S    C
Sbjct: 775 MILARLSRPHGC 786


>AY071090-1|AAL48712.2| 1454|Drosophila melanogaster RE15630p
           protein.
          Length = 1454

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
 Frame = -3

Query: 302 HGGCGREISGHHPRGNAYYECACSHRQ--------QKVVVHAGVLDGLSKH*AYPDL*QG 147
           H    R    H P+  A ++C   HR+          + VHAG  D ++     PD+ Q 
Sbjct: 714 HKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYINNQPVVPDVNQE 773

Query: 146 MLQRRTSSSTAC 111
           M+  R S    C
Sbjct: 774 MILARLSRPHGC 785


>AE014297-3788|AAF56460.1| 1266|Drosophila melanogaster CG11902-PA
           protein.
          Length = 1266

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 8/72 (11%)
 Frame = -3

Query: 302 HGGCGREISGHHPRGNAYYECACSHRQ--------QKVVVHAGVLDGLSKH*AYPDL*QG 147
           H    R    H P+  A ++C   HR+          + VHAG  D ++     PD+ Q 
Sbjct: 526 HKDLNRHKRLHQPQSAAQFDCPHCHRRFHRKDGLKSHLKVHAGNSDYINNQPVVPDVNQE 585

Query: 146 MLQRRTSSSTAC 111
           M+  R S    C
Sbjct: 586 MILARLSRPHGC 597


>BT001619-1|AAN71374.1|  773|Drosophila melanogaster RE35250p
           protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 288 KRDFWPSPQGKRLLR 244
           +RD WP PQGKR LR
Sbjct: 256 QRDPWPVPQGKRYLR 270


>AY113365-1|AAM29370.1|  366|Drosophila melanogaster LD23375p
           protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 308 HSHGGCGREISGHHPRGNAY-YECACSHRQQKVVVHAG 198
           HSHGG G    G H  G+++ +  A +H  Q + +  G
Sbjct: 164 HSHGGHGHSHGGGHGHGHSHGHTDAGNHNHQAITLDNG 201


>AY060223-1|AAL25262.1|  312|Drosophila melanogaster GH01163p
           protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 288 KRDFWPSPQGKRLLR 244
           +RD WP PQGKR LR
Sbjct: 54  QRDPWPVPQGKRYLR 68


>AJ276482-1|CAB81549.1|  769|Drosophila melanogaster putative Sec23
           protein protein.
          Length = 769

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 288 KRDFWPSPQGKRLLR 244
           +RD WP PQGKR LR
Sbjct: 252 QRDPWPVPQGKRYLR 266


>AE014297-1256|AAF54604.1|  366|Drosophila melanogaster CG6672-PA
           protein.
          Length = 366

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 308 HSHGGCGREISGHHPRGNAY-YECACSHRQQKVVVHAG 198
           HSHGG G    G H  G+++ +  A +H  Q + +  G
Sbjct: 164 HSHGGHGHSHGGGHGHGHSHGHTDAGNHNHQAITLDNG 201


>AE014297-319|AAF51979.2|  773|Drosophila melanogaster CG1250-PB,
           isoform B protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 288 KRDFWPSPQGKRLLR 244
           +RD WP PQGKR LR
Sbjct: 256 QRDPWPVPQGKRYLR 270


>AE014297-318|AAF51978.2|  773|Drosophila melanogaster CG1250-PA,
           isoform A protein.
          Length = 773

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = -2

Query: 288 KRDFWPSPQGKRLLR 244
           +RD WP PQGKR LR
Sbjct: 256 QRDPWPVPQGKRYLR 270


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,769,602
Number of Sequences: 53049
Number of extensions: 463690
Number of successful extensions: 1126
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1096
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1119
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)