Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_O01
(517 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0508 - 21607706-21608863,21608943-21609090,21609411-216095... 67 7e-12
09_06_0252 + 21867179-21867283,21868362-21868526,21868621-218687... 61 6e-10
08_02_1543 + 27783063-27783182,27784321-27784485,27784577-277846... 61 6e-10
02_05_1082 - 33976038-33978035 53 1e-07
06_03_0947 + 26248378-26248494,26248600-26248764,26248843-262489... 53 2e-07
08_02_0035 + 11453171-11455186 52 3e-07
08_02_1132 - 24530921-24532906 51 6e-07
05_01_0486 - 4047055-4049013 47 8e-06
02_05_0564 + 30003817-30005778 46 1e-05
10_01_0062 - 818396-818538,819482-819693,819936-820420,820540-82... 45 3e-05
03_02_0296 + 7191455-7191615,7192031-7192071,7192156-7192741,719... 40 9e-04
08_01_1047 - 10616113-10616669,10616727-10616953,10617564-106176... 40 0.002
08_01_0409 + 3625071-3625228,3625829-3625905,3626310-3626889,362... 37 0.011
08_02_1544 + 27787089-27787172,27787448-27787612,27787741-277878... 36 0.015
11_01_0518 + 4057428-4057538,4059609-4059801,4059921-4060025,406... 33 0.14
10_08_1047 - 22549376-22551271 30 1.3
11_06_0181 + 20985960-20987825,20987904-20989169 29 1.7
07_03_0719 + 20920331-20920535,20920588-20920763,20920901-209211... 29 2.9
05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536... 28 3.9
01_01_0148 - 1337494-1338057 27 6.8
>06_03_0508 -
21607706-21608863,21608943-21609090,21609411-21609523,
21609612-21609705,21609841-21609950,21610093-21610257,
21611660-21611800
Length = 642
Score = 67.3 bits (157), Expect = 7e-12
Identities = 35/99 (35%), Positives = 63/99 (63%), Gaps = 1/99 (1%)
Frame = +1
Query: 205 VMSPKLYAVCVLLLIAS-TKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVI 381
++ P L+A +LL AS +AFYLPG+AP ++ +D +E+ + VN+L++ ++ +
Sbjct: 14 LLPPLLFAAALLLSAASPARAFYLPGVAPRDF--QKD------DELQVKVNKLSSTKTQL 65
Query: 382 PFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIK 498
P++Y+ D+C + ++ ENLG+V+ G+RI S Y K
Sbjct: 66 PYDYYFLDYCKPEAIKNSAENLGEVLRGDRIENSVYNFK 104
>09_06_0252 +
21867179-21867283,21868362-21868526,21868621-21868730,
21868802-21868904,21868998-21869110,21869204-21869357,
21869476-21870633
Length = 635
Score = 60.9 bits (141), Expect = 6e-10
Identities = 31/94 (32%), Positives = 50/94 (53%)
Frame = +1
Query: 226 AVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFD 405
A+ LL A FYLPG+AP ++ + +P+ VN+L + ++ +P+ Y+
Sbjct: 10 ALVALLAAAPAAGFYLPGVAPTDFGKGDS--------LPVKVNKLTSVKTQLPYAYYSLP 61
Query: 406 FCTADESESPVENLGQVVFGERIRPSPYKIKFLE 507
FC + ENLG+V+ G+RI SPY + E
Sbjct: 62 FCKPETIVDSAENLGEVLRGDRIENSPYVFQMRE 95
>08_02_1543 +
27783063-27783182,27784321-27784485,27784577-27784686,
27784771-27784876,27784952-27785050,27785450-27786607
Length = 585
Score = 60.9 bits (141), Expect = 6e-10
Identities = 37/97 (38%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Frame = +1
Query: 226 AVCVLLLIASTK---AFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYH 396
A+ LLLIA+ AFYLPG+AP D K K+ + + VN+L++ ++ +P+ Y+
Sbjct: 12 ALVFLLLIAAAPPAAAFYLPGVAP------NDFQK--KDPLQVKVNKLSSTKTQLPYSYY 63
Query: 397 HFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLE 507
FC D ENLG+V+ G+RI SPY + E
Sbjct: 64 SLPFCKPDTIVDSAENLGEVLRGDRIENSPYVFEMRE 100
>02_05_1082 - 33976038-33978035
Length = 665
Score = 53.2 bits (122), Expect = 1e-07
Identities = 31/91 (34%), Positives = 45/91 (49%), Gaps = 1/91 (1%)
Frame = +1
Query: 229 VCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDF 408
V V L FYLPG P Y E + + VN L + ++ IP+ Y+ F
Sbjct: 16 VAVSLSAPGADGFYLPGSYPHKYNPGEP--------LSVKVNSLTSIDTEIPYSYYSLPF 67
Query: 409 CTA-DESESPVENLGQVVFGERIRPSPYKIK 498
CT D + ENLG+++ G+RI SPY+ +
Sbjct: 68 CTPPDGVKDSAENLGELLMGDRIENSPYRFR 98
>06_03_0947 +
26248378-26248494,26248600-26248764,26248843-26248952,
26249065-26249179,26249310-26249408,26249485-26249694,
26249802-26250965
Length = 659
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/96 (31%), Positives = 51/96 (53%)
Frame = +1
Query: 220 LYAVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHH 399
L V VL + + FYLPG+AP ++ K+++ + VN+L++ ++ +P+ Y+
Sbjct: 12 LVVVMVLAGAGAARGFYLPGVAPRDFRK--------KDQLAVKVNQLSSIKTQLPYSYYS 63
Query: 400 FDFCTADESESPVENLGQVVFGERIRPSPYKIKFLE 507
FC ENLG+V+ G+RI S Y + E
Sbjct: 64 LPFCRPATIVDSAENLGEVLRGDRIENSLYVFEMRE 99
>08_02_0035 + 11453171-11455186
Length = 671
Score = 52.0 bits (119), Expect = 3e-07
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 6/106 (5%)
Frame = +1
Query: 208 MSPK-LYAVCVLLLIAS----TKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEE 372
M+P+ +A+ ++LL+ S AFYLPG P Y E + VN L +
Sbjct: 7 MAPRSTFAIFLILLLRSGHSPAAAFYLPGSYPHRYRPGE--------ALAAKVNSLTSPS 58
Query: 373 SVIPFEYHHFDFCTADESES-PVENLGQVVFGERIRPSPYKIKFLE 507
S +PF Y+ FC + E+LG+++ G+RI SPY+ L+
Sbjct: 59 SKLPFPYYSLPFCAPQGGVNRAAESLGELLLGDRIETSPYRFSMLK 104
>08_02_1132 - 24530921-24532906
Length = 661
Score = 50.8 bits (116), Expect = 6e-07
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +1
Query: 211 SPKLYAVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFE 390
+P L+A+ +LL ++ AFYLPG Y E EI VN L + E+ +PF
Sbjct: 12 APLLWAL-LLLTVSPGNAFYLPGSYMHTYSQGE--------EIWAKVNSLTSIETEMPFS 62
Query: 391 YHHFDFCTADES-ESPVENLGQVVFGERIRPSPYKIK 498
Y+ +C + ENLG+++ G++I SPY+ +
Sbjct: 63 YYSLPYCRPQGGIKKSAENLGELLMGDQIDNSPYRFR 99
>05_01_0486 - 4047055-4049013
Length = 652
Score = 47.2 bits (107), Expect = 8e-06
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Frame = +1
Query: 223 YAVCVLL-LIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHH 399
Y + VL+ L FYLPG Y T I VN L + E+ +PF Y+
Sbjct: 10 YLLVVLVSLHGGANGFYLPGTFMHTY--------TPNEVISAKVNSLTSIETELPFSYYS 61
Query: 400 FDFCTADES-ESPVENLGQVVFGERIRPSPYKIK 498
+C E + ENLG+++ G++I SPY+ +
Sbjct: 62 LPYCKPPEGVKKSAENLGEILMGDQIDNSPYRFR 95
>02_05_0564 + 30003817-30005778
Length = 653
Score = 46.4 bits (105), Expect = 1e-05
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Frame = +1
Query: 238 LLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTA 417
L+L +AFYLPG Y E EI VN L + E+ +PF Y+ +C
Sbjct: 15 LVLAPHCEAFYLPGSYMHTYRQGE--------EIWAKVNSLTSIETELPFSYYSLPYCHP 66
Query: 418 DES-ESPVENLGQVVFGERIRPSPYKIK 498
+ ENLG+++ G++I SPY+ +
Sbjct: 67 QGGIKKSAENLGELLMGDQIDNSPYRFR 94
>10_01_0062 -
818396-818538,819482-819693,819936-820420,820540-820696,
820787-820924,821127-821703,821978-822018,822679-822809
Length = 627
Score = 45.2 bits (102), Expect = 3e-05
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 4/86 (4%)
Frame = +1
Query: 271 LPGLAPVNYCTAEDTVKTCKNE-IPLYVNRLNTEESVIPFE-YHHFD--FCTADESESPV 438
L GL + C A D+ + + +PLY N++ + P E Y +FD FC ++ + +
Sbjct: 7 LLGLVMLVGCAAADSHRYRPGDAVPLYANKVGPFHN--PSETYRYFDLPFCAPEKVKDKI 64
Query: 439 ENLGQVVFGERIRPSPYKIKFLEKID 516
E LG+V+ G+R+ +PYK+ F D
Sbjct: 65 EALGEVLNGDRLVDAPYKLDFRVDFD 90
>03_02_0296 +
7191455-7191615,7192031-7192071,7192156-7192741,
7193307-7193444,7193572-7193728,7193848-7194332,
7194867-7195086
Length = 595
Score = 40.3 bits (90), Expect = 9e-04
Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +1
Query: 337 IPLYVNRLNTEESVIPFE-YHHFD--FCTADESESPVENLGQVVFGERIRPSPYKIKF 501
+PLY N++ + P E Y +FD FC+ ++ + E LG+V+ G+R+ +PYK+ F
Sbjct: 40 VPLYANKVGPFHN--PSETYRYFDLPFCSPEKVKEKSEALGEVLNGDRLVDAPYKLDF 95
>08_01_1047 -
10616113-10616669,10616727-10616953,10617564-10617649,
10617949-10618080,10618867-10618959
Length = 364
Score = 39.5 bits (88), Expect = 0.002
Identities = 28/90 (31%), Positives = 46/90 (51%)
Frame = +1
Query: 226 AVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFD 405
A+ L L FYLPG+AP N+ K+ + + VN+L + ++ +P+ Y
Sbjct: 6 ALAALCLAGLAAGFYLPGVAPNNF--------DKKDPLQVKVNKLTSIKTQLPYSY---- 53
Query: 406 FCTADESESPVENLGQVVFGERIRPSPYKI 495
D + +NLG+V+ G+RI SPY +
Sbjct: 54 ---VDSA----QNLGEVLRGDRIENSPYTL 76
>08_01_0409 +
3625071-3625228,3625829-3625905,3626310-3626889,
3626974-3627111,3627318-3627387,3627449-3627933,
3628681-3628890,3629259-3629326,3629855-3629961,
3630275-3630346,3630448-3630614,3630709-3630820,
3631464-3631650,3632174-3632286
Length = 847
Score = 36.7 bits (81), Expect = 0.011
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +1
Query: 385 FEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLE 507
+ Y+ FC D + E LG+V+ G+R+ +PY++ F E
Sbjct: 68 YRYYDLPFCAPDHPKDKREALGEVLNGDRLVDAPYELNFKE 108
>08_02_1544 +
27787089-27787172,27787448-27787612,27787741-27787850,
27788360-27788513,27788643-27788937,27788996-27789798
Length = 536
Score = 36.3 bits (80), Expect = 0.015
Identities = 16/56 (28%), Positives = 30/56 (53%)
Frame = +1
Query: 331 NEIPLYVNRLNTEESVIPFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIK 498
+E+ + +N L + E+ I + Y+ FC D L Q++ G+R + SPY+ +
Sbjct: 30 DEVLVKMNELMSIETQITYSYYSLPFCRPDNLTESAPTLWQLLHGDRQQRSPYQFE 85
>11_01_0518 +
4057428-4057538,4059609-4059801,4059921-4060025,
4060259-4060347,4060424-4060576,4060754-4060888,
4061241-4061407,4062129-4062223,4062367-4062740,
4062903-4063176,4063806-4063822
Length = 570
Score = 33.1 bits (72), Expect = 0.14
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 304 AEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTADESESPVEN---LGQVVFGERI 474
AE+TVK N++ Y N T + Y+ FC SE+P LG+V+ G +
Sbjct: 40 AEETVKLWVNKVGPYNNPQET------YNYYSLPFC--QPSENPAHKWGGLGEVLGGNEL 91
Query: 475 RPSPYKIKFLEKID 516
S IKFL+ ++
Sbjct: 92 IDSQVDIKFLKNVE 105
>10_08_1047 - 22549376-22551271
Length = 631
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 122 SNLYVHAYILCDYFQLIYHNGRLNNNITSCRQNCMLFAFCYS 247
SN YVHA ILC + ++ L + RQN L A CY+
Sbjct: 450 SNAYVHAAILCGLVKKGHNRMALMILNEAVRQNYALDAVCYT 491
>11_06_0181 + 20985960-20987825,20987904-20989169
Length = 1043
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 319 KTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTADESESPVENLGQ 453
+TCK + ++ + SVI + Y FDFC + ++E E++ Q
Sbjct: 383 QTCKKNVTDTASQKSVN-SVIAYPYPDFDFCKSRDAEETDESIKQ 426
>07_03_0719 +
20920331-20920535,20920588-20920763,20920901-20921111,
20921240-20921477,20921613-20921763,20921878-20922186
Length = 429
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Frame = +1
Query: 259 KAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFD-FCTADESESP 435
+AF LAP+ +C +V T E+ + EES F + FD A ++ S
Sbjct: 54 RAFADTLLAPMLHCPGTVSVPTMSMEMEQVLKLWRIEESGSEFSLYDFDQIADATDNFSD 113
Query: 436 VENLGQVVFG 465
LGQ FG
Sbjct: 114 ACKLGQGGFG 123
>05_01_0599 +
5368091-5368123,5368212-5368383,5369237-5369335,
5369636-5369748,5369824-5369916,5370081-5370244,
5370328-5370564,5370739-5370883,5370982-5371160,
5371997-5372142,5372239-5372366,5372441-5372614,
5372706-5372735,5373219-5373380,5373460-5373705,
5373733-5373870,5373974-5374174,5374304-5374448,
5374575-5374681,5374830-5374970,5375274-5375539,
5375621-5375745,5375843-5376109,5376250-5376263
Length = 1174
Score = 28.3 bits (60), Expect = 3.9
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = +2
Query: 137 HAYILCDYFQLIYHNGRL 190
H Y+ C F +I HNGRL
Sbjct: 93 HYYLSCQIFDIIKHNGRL 110
>01_01_0148 - 1337494-1338057
Length = 187
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 265 FYLPGLAPVNYCTAEDTVKTCKNEIPLYVN 354
F+L GLA + TA+DT T N I L ++
Sbjct: 9 FFLAGLAAAHGSTADDTTTTTTNTIRLPID 38
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,121,820
Number of Sequences: 37544
Number of extensions: 250449
Number of successful extensions: 536
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 525
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1118831240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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