SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_O01
         (517 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.                   118   9e-27
BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9 superfa...   118   9e-27
BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9 superfa...   118   9e-27
AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9 superfa...   118   9e-27
D87444-1|BAA13385.2|  692|Homo sapiens KIAA0255 protein.               55   1e-07
BC022850-1|AAH22850.1|  625|Homo sapiens transmembrane 9 superfa...    53   7e-07
BC021107-1|AAH21107.1|  625|Homo sapiens transmembrane 9 superfa...    53   7e-07
AL049539-3|CAB75607.2|  625|Homo sapiens transmembrane 9 superfa...    53   7e-07
AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens ...    46   1e-04
U94831-1|AAC51782.1|  606|Homo sapiens multispanning membrane pr...    37   0.048
BC010856-1|AAH10856.1|  606|Homo sapiens transmembrane 9 superfa...    37   0.048
AB065800-1|BAC06019.1|  325|Homo sapiens seven transmembrane hel...    31   3.2  
AY358243-1|AAQ88610.1|  189|Homo sapiens ELCV5929 protein.             29   7.3  

>U81006-1|AAB38973.1|  663|Homo sapiens p76 protein.
          Length = 663

 Score =  118 bits (285), Expect = 9e-27
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +1

Query: 214 PKLYAVCVLLLIA-----STKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESV 378
           P+L  + +LLL A      + AFYLPGLAPVN+C  E     CK EI L+VNRL++ ESV
Sbjct: 14  PRLLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESV 73

Query: 379 IPFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLEK 510
           +P+EY  FDFC A E + P ENLGQV+FGERI PSPYK  F +K
Sbjct: 74  LPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKK 117


>BC130293-1|AAI30294.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score =  118 bits (285), Expect = 9e-27
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +1

Query: 214 PKLYAVCVLLLIA-----STKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESV 378
           P+L  + +LLL A      + AFYLPGLAPVN+C  E     CK EI L+VNRL++ ESV
Sbjct: 14  PRLLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESV 73

Query: 379 IPFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLEK 510
           +P+EY  FDFC A E + P ENLGQV+FGERI PSPYK  F +K
Sbjct: 74  LPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKK 117


>BC110656-1|AAI10657.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score =  118 bits (285), Expect = 9e-27
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +1

Query: 214 PKLYAVCVLLLIA-----STKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESV 378
           P+L  + +LLL A      + AFYLPGLAPVN+C  E     CK EI L+VNRL++ ESV
Sbjct: 14  PRLLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESV 73

Query: 379 IPFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLEK 510
           +P+EY  FDFC A E + P ENLGQV+FGERI PSPYK  F +K
Sbjct: 74  LPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKK 117


>AL139035-1|CAH71381.1|  663|Homo sapiens transmembrane 9
           superfamily member 2 protein.
          Length = 663

 Score =  118 bits (285), Expect = 9e-27
 Identities = 59/104 (56%), Positives = 72/104 (69%), Gaps = 5/104 (4%)
 Frame = +1

Query: 214 PKLYAVCVLLLIA-----STKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESV 378
           P+L  + +LLL A      + AFYLPGLAPVN+C  E     CK EI L+VNRL++ ESV
Sbjct: 14  PRLLLLSLLLLGAVPGPRRSGAFYLPGLAPVNFCDEEKKSDECKAEIELFVNRLDSVESV 73

Query: 379 IPFEYHHFDFCTADESESPVENLGQVVFGERIRPSPYKIKFLEK 510
           +P+EY  FDFC A E + P ENLGQV+FGERI PSPYK  F +K
Sbjct: 74  LPYEYTAFDFCQASEGKRPSENLGQVLFGERIEPSPYKFTFNKK 117


>D87444-1|BAA13385.2|  692|Homo sapiens KIAA0255 protein.
          Length = 692

 Score = 55.2 bits (127), Expect = 1e-07
 Identities = 25/91 (27%), Positives = 51/91 (56%)
 Frame = +1

Query: 223 YAVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHF 402
           +++ +  L+  T AFY+PG+AP+N+           + + +   +L +  + +P+EY+  
Sbjct: 60  WSLLLFSLMCETSAFYVPGVAPINFHQ--------NDPVEIKAVKLTSSRTQLPYEYYSL 111

Query: 403 DFCTADESESPVENLGQVVFGERIRPSPYKI 495
            FC   +     ENLG+V+ G+RI  +P+++
Sbjct: 112 PFCQPSKITYKAENLGEVLRGDRIVNTPFQV 142


>BC022850-1|AAH22850.1|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 24/83 (28%), Positives = 46/83 (55%)
 Frame = +1

Query: 247 IASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTADES 426
           +  T AFY+PG+AP+N+           + + +   +L +  + +P+EY+   FC   + 
Sbjct: 1   MCETSAFYVPGVAPINFHQ--------NDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKI 52

Query: 427 ESPVENLGQVVFGERIRPSPYKI 495
               ENLG+V+ G+RI  +P+++
Sbjct: 53  TYKAENLGEVLRGDRIVNTPFQV 75


>BC021107-1|AAH21107.1|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 24/83 (28%), Positives = 46/83 (55%)
 Frame = +1

Query: 247 IASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTADES 426
           +  T AFY+PG+AP+N+           + + +   +L +  + +P+EY+   FC   + 
Sbjct: 1   MCETSAFYVPGVAPINFHQ--------NDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKI 52

Query: 427 ESPVENLGQVVFGERIRPSPYKI 495
               ENLG+V+ G+RI  +P+++
Sbjct: 53  TYKAENLGEVLRGDRIVNTPFQV 75


>AL049539-3|CAB75607.2|  625|Homo sapiens transmembrane 9
           superfamily protein member 4 protein.
          Length = 625

 Score = 52.8 bits (121), Expect = 7e-07
 Identities = 24/83 (28%), Positives = 46/83 (55%)
 Frame = +1

Query: 247 IASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCTADES 426
           +  T AFY+PG+AP+N+           + + +   +L +  + +P+EY+   FC   + 
Sbjct: 1   MCETSAFYVPGVAPINFHQ--------NDPVEIKAVKLTSSRTQLPYEYYSLPFCQPSKI 52

Query: 427 ESPVENLGQVVFGERIRPSPYKI 495
               ENLG+V+ G+RI  +P+++
Sbjct: 53  TYKAENLGEVLRGDRIVNTPFQV 75


>AK126534-1|BAC86581.1|  528|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44570 fis, clone UTERU3011063, highly  similar
           to Transmembrane 9 superfamily protein member 4. ).
          Length = 528

 Score = 45.6 bits (103), Expect = 1e-04
 Identities = 21/79 (26%), Positives = 42/79 (53%)
 Frame = +1

Query: 223 YAVCVLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHF 402
           +++ +  L+  T AFY+PG+AP+N+           + + +   +L +  + +P+EY+  
Sbjct: 10  WSLLLFSLMCETSAFYVPGVAPINFHQ--------NDPVEIKAVKLTSSRTQLPYEYYSL 61

Query: 403 DFCTADESESPVENLGQVV 459
            FC   +     ENLG+V+
Sbjct: 62  PFCQPSKITYKAENLGEVL 80


>U94831-1|AAC51782.1|  606|Homo sapiens multispanning membrane
           protein protein.
          Length = 606

 Score = 36.7 bits (81), Expect = 0.048
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = +1

Query: 235 VLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCT 414
           +L+L+  T   + PG+  V +  A D V    N++  Y N   T      + Y+    C 
Sbjct: 17  ILILLLGTG--HGPGVEGVTHYKAGDPVILYVNKVGPYHNPQET------YHYYQLPVCC 68

Query: 415 ADESESPVENLGQVVFGERIRPSPYKIKFLEKID 516
            ++      +LG+V+ G+R+  S Y+I+F E ++
Sbjct: 69  PEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVE 102


>BC010856-1|AAH10856.1|  606|Homo sapiens transmembrane 9
           superfamily member 1 protein.
          Length = 606

 Score = 36.7 bits (81), Expect = 0.048
 Identities = 25/94 (26%), Positives = 46/94 (48%)
 Frame = +1

Query: 235 VLLLIASTKAFYLPGLAPVNYCTAEDTVKTCKNEIPLYVNRLNTEESVIPFEYHHFDFCT 414
           +L+L+  T   + PG+  V +  A D V    N++  Y N   T      + Y+    C 
Sbjct: 17  ILILLLGTG--HGPGVEGVTHYKAGDPVILYVNKVGPYHNPQET------YHYYQLPVCC 68

Query: 415 ADESESPVENLGQVVFGERIRPSPYKIKFLEKID 516
            ++      +LG+V+ G+R+  S Y+I+F E ++
Sbjct: 69  PEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVE 102


>AB065800-1|BAC06019.1|  325|Homo sapiens seven transmembrane helix
           receptor protein.
          Length = 325

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
 Frame = +2

Query: 71  IASGAIVLCTIM*-ITYFSNLYVHAYILCDYFQLIYHNGRLNNNITSCRQNCMLFAF 238
           I  G   +C ++  IT  +  YVH  ILC  F+L  H  RL +  T     C++ AF
Sbjct: 198 IIYGLCAICNLVFDITVIALSYVH--ILCAVFRLPTHEARLKSLSTCGSHVCVILAF 252


>AY358243-1|AAQ88610.1|  189|Homo sapiens ELCV5929 protein.
          Length = 189

 Score = 29.5 bits (63), Expect = 7.3
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -1

Query: 355 C*RRVVFHSYKFSRCLLLYNSSQGLSRVNK 266
           C +  +FHS+  S+CL L  SS G+  V+K
Sbjct: 68  CFKGPLFHSWFISKCLCLVRSSLGVEPVDK 97


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,109,140
Number of Sequences: 237096
Number of extensions: 1454396
Number of successful extensions: 5721
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5658
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5716
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4876707572
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -