Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_N21
         (541 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014638-1|AAT27262.1|  433|Drosophila melanogaster RH44447p pro...    35   0.082
AE014297-1395|AAF54710.1|  425|Drosophila melanogaster CG6959-PA...    35   0.082

>BT014638-1|AAT27262.1|  433|Drosophila melanogaster RH44447p
           protein.
          Length = 433

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -1

Query: 538 RAAMNRNNRHTAMFSDEIEH*QPQIITNILR*VTVSIIGC*Y**IMPFDTETLQKELHEM 359
           R  +N NN   + + DE+ H  P++ +N +   ++ +            +  L ++LH++
Sbjct: 131 RLILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLHLTDA----FEDNSSPQLSEDLHDI 186

Query: 358 YIHNIL*K-KKLHLD 317
           ++++ L K +KLHL+
Sbjct: 187 FVNSQLVKLQKLHLE 201


>AE014297-1395|AAF54710.1|  425|Drosophila melanogaster CG6959-PA,
           isoform A protein.
          Length = 425

 Score = 34.7 bits (76), Expect = 0.082
 Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
 Frame = -1

Query: 538 RAAMNRNNRHTAMFSDEIEH*QPQIITNILR*VTVSIIGC*Y**IMPFDTETLQKELHEM 359
           R  +N NN   + + DE+ H  P++ +N +   ++ +            +  L ++LH++
Sbjct: 123 RLILNHNNLSISRYEDEVNHHHPRVFSNFINLQSLHLTDA----FEDNSSPQLSEDLHDI 178

Query: 358 YIHNIL*K-KKLHLD 317
           ++++ L K +KLHL+
Sbjct: 179 FVNSQLVKLQKLHLE 193


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,317,372
Number of Sequences: 53049
Number of extensions: 306052
Number of successful extensions: 595
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 595
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 2053700352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)