Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_N14
         (581 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p pro...    30   2.6  
AE014134-336|AAF51309.2|  402|Drosophila melanogaster CG15377-PA...    30   2.6  

>AY060438-1|AAL25477.1|  906|Drosophila melanogaster LD46618p
           protein.
          Length = 906

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 18/64 (28%), Positives = 30/64 (46%)
 Frame = +1

Query: 388 LNNLSAPINSKFYFTSITAGDILKAFKQLNLKHTQDIWGMSVMVLQTMIVNISPYLANIF 567
           L++L  P+        I   +I++A K L LK +  I  +    L+ + V    YLA I+
Sbjct: 421 LDSLETPLQMSLPIKPIRVEEIVEAIKSLPLKKSPGIDNVCNATLKALPVRAILYLALIY 480

Query: 568 NGCI 579
           N  +
Sbjct: 481 NAIL 484


>AE014134-336|AAF51309.2|  402|Drosophila melanogaster CG15377-PA
           protein.
          Length = 402

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 15/61 (24%), Positives = 33/61 (54%)
 Frame = -1

Query: 290 LFEICTPSTFRLSVLLFILLFPVSLFMMCQTVLTLFLDTRTLFPKNFALASIHTRLKVFE 111
           + + CT  T + +V++ ++ F  + F++C T+L + L+T +L    +    I    ++F 
Sbjct: 266 IIDFCTDLTRQFTVIV-LMHFLSAAFVLCSTILDIMLNTSSLSGLTYICYIIAALTQLFL 324

Query: 110 Y 108
           Y
Sbjct: 325 Y 325


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,747,642
Number of Sequences: 53049
Number of extensions: 416063
Number of successful extensions: 860
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 860
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2317436688
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)