Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N12
(330 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 200 1e-52
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 200 1e-52
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 171 8e-44
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 129 4e-31
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 129 4e-31
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 113 1e-30
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 116 5e-27
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 83 5e-17
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 83 5e-17
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 78 2e-15
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 78 2e-15
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 78 2e-15
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 45 1e-05
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 42 8e-05
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 40 6e-04
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 38 0.002
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 36 0.007
AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 34 0.028
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.064
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 31 0.15
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 31 0.15
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 31 0.26
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 31 0.26
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 30 0.45
DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 30 0.45
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 29 0.60
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 29 1.0
Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical pr... 27 2.4
Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical pr... 27 2.4
U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical pr... 27 3.2
Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 4.2
Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical pr... 27 4.2
CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical ... 27 4.2
AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical ... 27 4.2
AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical ... 27 4.2
AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical ... 27 4.2
Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 26 5.5
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 26 5.5
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 26 5.5
AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical ... 26 7.3
AF025469-3|AAG00031.2| 271|Caenorhabditis elegans Hypothetical ... 25 9.7
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 200 bits (489), Expect = 1e-52
Identities = 94/103 (91%), Positives = 98/103 (95%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+R
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEAR 166
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 200 bits (489), Expect = 1e-52
Identities = 94/103 (91%), Positives = 98/103 (95%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
EAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE+R
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEAR 166
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 171 bits (417), Expect = 8e-44
Identities = 80/86 (93%), Positives = 83/86 (96%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GTGEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGTGEF 123
Query: 199 EAGISKNGQTREHALLAFTLGVKQLI 276
EAGISKNGQTREHALLA TLGVKQL+
Sbjct: 124 EAGISKNGQTREHALLAQTLGVKQLV 149
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 129 bits (312), Expect = 4e-31
Identities = 59/98 (60%), Positives = 74/98 (75%)
Frame = +1
Query: 13 QTKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 192
+T+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TG
Sbjct: 225 ETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 284
Query: 193 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 306
EFE G GQT+EHALL +LGV QLIV VNK+D+ +
Sbjct: 285 EFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 322
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 129 bits (312), Expect = 4e-31
Identities = 59/98 (60%), Positives = 74/98 (75%)
Frame = +1
Query: 13 QTKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 192
+T+ ERERG+T+DI FET + ++DAPGH+DFI NMITGTSQAD A+L+V A TG
Sbjct: 243 ETEEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTG 302
Query: 193 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 306
EFE G GQT+EHALL +LGV QLIV VNK+D+ +
Sbjct: 303 EFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD 340
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 113 bits (272), Expect(2) = 1e-30
Identities = 51/54 (94%), Positives = 53/54 (98%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 180
KAERERGITIDIALWKFET KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA
Sbjct: 64 KAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117
Score = 35.5 bits (78), Expect(2) = 1e-30
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 271 LIVGVNKMDSTEPPYSESR 327
L+V NKMDSTEPP+SE+R
Sbjct: 114 LVVACNKMDSTEPPFSEAR 132
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 116 bits (278), Expect = 5e-27
Identities = 52/101 (51%), Positives = 70/101 (69%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 204
ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A GEFE
Sbjct: 168 EREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRGEFET 227
Query: 205 GISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
G + GQTREH++L T GVK L++ VNKMD + E R
Sbjct: 228 GFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEER 268
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 83.0 bits (196), Expect = 5e-17
Identities = 45/96 (46%), Positives = 60/96 (62%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 306
E QT+EH +LA +GVK + + +NK D E
Sbjct: 147 E-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 83.0 bits (196), Expect = 5e-17
Identities = 45/96 (46%), Positives = 60/96 (62%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
K E++RGITI++A +E+ + D PGH DFIKNMI GTSQ D AVL++AA G
Sbjct: 87 KEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKNMICGTSQMDVAVLVIAATDGVM 146
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 306
E QT+EH +LA +GVK + + +NK D E
Sbjct: 147 E-------QTKEHLILAKQVGVKNMAIFINKADLVE 175
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 77.8 bits (183), Expect = 2e-15
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 204
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 93 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 151
Query: 205 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESR 327
QTREH LLA +GV ++V +NK+D E P +E+R
Sbjct: 152 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 186
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 77.8 bits (183), Expect = 2e-15
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 204
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 205 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESR 327
QTREH LLA +GV ++V +NK+D E P +E+R
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 77.8 bits (183), Expect = 2e-15
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 2/103 (1%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 204
E+ RGITI+ ++ET K + ID PGH D+IKNMITG +Q + A+L+VAA G
Sbjct: 94 EKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGPMP- 152
Query: 205 GISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSESR 327
QTREH LLA +GV ++V +NK+D E P +E+R
Sbjct: 153 ------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR 187
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 44.8 bits (101), Expect = 1e-05
Identities = 31/93 (33%), Positives = 44/93 (47%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
+ ERERGIT+ Y + +ID PGH DF + + D +L+VAA G
Sbjct: 81 QVERERGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG-- 138
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 297
QT + LAF + Q+I +NK+D
Sbjct: 139 -----VQAQTIANFWLAFEKNI-QIIPVINKID 165
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 42.3 bits (95), Expect = 8e-05
Identities = 34/88 (38%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Frame = +1
Query: 37 GITIDIALWKFETGK-YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 213
GIT I + E K VT +D PGH F G AD VL+VAA G E
Sbjct: 188 GITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKGADIVVLVVAADDGVKE---- 243
Query: 214 KNGQTREHALLAFTLGVKQLIVGVNKMD 297
QT + A V QL+V VNK+D
Sbjct: 244 ---QTAQSIKFAKDANV-QLVVAVNKID 267
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 39.5 bits (88), Expect = 6e-04
Identities = 24/73 (32%), Positives = 39/73 (53%)
Frame = +1
Query: 88 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 267
+ +ID PGH I+ ++ ++ D A++I+ + AGI QT EH LLA
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAGIQP--QTAEHLLLASKFCPN 126
Query: 268 QLIVGVNKMDSTE 306
++I+ +NK D E
Sbjct: 127 RVIIVLNKCDLAE 139
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 37.9 bits (84), Expect = 0.002
Identities = 31/91 (34%), Positives = 40/91 (43%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA 204
ER+RGITI A + + IID PGH DF + D AVL++ G G
Sbjct: 93 ERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG---- 147
Query: 205 GISKNGQTREHALLAFTLGVKQLIVGVNKMD 297
G+ T L + + I VNKMD
Sbjct: 148 GVQSQTFTVNRQLARYNV---PFICFVNKMD 175
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 35.9 bits (79), Expect = 0.007
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +1
Query: 25 ERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 192
ERERGIT+ A + + + +ID PGH DF + D V+++ G
Sbjct: 71 ERERGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126
>AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical
protein Y39G10AR.8 protein.
Length = 469
Score = 33.9 bits (74), Expect = 0.028
Identities = 20/71 (28%), Positives = 32/71 (45%)
Frame = +1
Query: 85 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 264
+V+ +D PGH + M+ G + D A L+VA QT EH + +
Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181
Query: 265 KQLIVGVNKMD 297
L++ NK+D
Sbjct: 182 NHLMILQNKVD 192
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 32.7 bits (71), Expect = 0.064
Identities = 18/43 (41%), Positives = 22/43 (51%)
Frame = -2
Query: 290 LFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTA 162
LF PT+SC+ AS S P PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 1 RHEGQTKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 177
R+ + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 56 RYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 31.5 bits (68), Expect = 0.15
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 1 RHEGQTKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 177
R+ + E+ RGIT+ + + +ID+PGH DF + + +D A+L++
Sbjct: 56 RYMDSREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 25 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 189
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 177 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 236
Query: 190 G 192
G
Sbjct: 237 G 237
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 30.7 bits (66), Expect = 0.26
Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 5/61 (8%)
Frame = +1
Query: 25 ERERGITI-----DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 189
E++RG +I I + Y + IID PGH +F M AD V++V A
Sbjct: 52 EKQRGCSIKSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHE 111
Query: 190 G 192
G
Sbjct: 112 G 112
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 29.9 bits (64), Expect = 0.45
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 43 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 192
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALGVTDGALVVVDCVSG 146
>DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic
translation initiationfactor eIF5B protein.
Length = 1074
Score = 29.9 bits (64), Expect = 0.45
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = +1
Query: 94 IIDAPGHRDFIKNMITGTSQADCAVLIV 177
IID PGH F G+S D A+L+V
Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV 580
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 29.5 bits (63), Expect = 0.60
Identities = 13/50 (26%), Positives = 26/50 (52%)
Frame = +1
Query: 43 TIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 192
T+++ K + + + +ID+PGH DF + D A+++V +G
Sbjct: 97 TVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALRVTDGALVVVDCVSG 146
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 28.7 bits (61), Expect = 1.0
Identities = 19/44 (43%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Frame = +1
Query: 61 WKFETGKYY-VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 183
++ E G+ V IID+ G RDFI KN+ GT AD +++ AA
Sbjct: 63 YEIEEGRVLMVQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104
>Z68106-8|CAA92125.2| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 299 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 120
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 119 SLCPGASMMVT*YLPVS-NFQRAISMVI 39
G + + +P + F +S++I
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLI 236
>Z49153-3|CAD30426.1| 558|Caenorhabditis elegans Hypothetical
protein F41E7.2 protein.
Length = 558
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/88 (21%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = -2
Query: 299 ESILFTPTISCLTPSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMFLMK 120
++ +F P + + +A C C FF+ P S + ++T A +P M +K
Sbjct: 150 KNYIFPPILGLGSAFSEALAICFTACVFFDFPLSLGLICGFVVATVSPAVGMPT-MIRLK 208
Query: 119 SLCPGASMMVT*YLPVS-NFQRAISMVI 39
G + + +P + F +S++I
Sbjct: 209 EQGIGTTNNIPDVVPAACCFDNVVSLLI 236
>U41272-4|AAA82448.2| 349|Caenorhabditis elegans Hypothetical
protein T03G11.3 protein.
Length = 349
Score = 27.1 bits (57), Expect = 3.2
Identities = 15/42 (35%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Frame = -2
Query: 281 PTISCLTPSVKASRACSRVCPFFE--IPASNSPVPAATISTA 162
PT+ +TPS K S + R P + P PA+T +TA
Sbjct: 270 PTLPPMTPSSKRSSSAKRDAPLQQSSTPQQRLKTPASTTTTA 311
>Z83227-6|CAB54250.1| 1427|Caenorhabditis elegans Hypothetical protein
F14F4.3b protein.
Length = 1427
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 177 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESN 52
D++H AV + +S+H +++ S S + DIV E +S+
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSS 1394
>Z83227-5|CAB54251.1| 1400|Caenorhabditis elegans Hypothetical protein
F14F4.3a protein.
Length = 1400
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 177 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESN 52
D++H AV + +S+H +++ S S + DIV E +S+
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSS 1367
>CU457740-1|CAM36331.1| 122|Caenorhabditis elegans Hypothetical
protein C50E10.1 protein.
Length = 122
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = -2
Query: 260 PSVKASRACSRVCPFFEIPASNSPVPAATISTAQSA*DVPVIMF 129
P+ ++ ++ F+ IP+ N P +AT ST+ ++P I F
Sbjct: 43 PTSPSTDIGEQMASFWNIPSPNPPATSATSSTSPEE-EIPCICF 85
>AL021446-3|CAB54225.1| 1427|Caenorhabditis elegans Hypothetical
protein F14F4.3b protein.
Length = 1427
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 177 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESN 52
D++H AV + +S+H +++ S S + DIV E +S+
Sbjct: 1353 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSS 1394
>AL021446-2|CAB54226.1| 1400|Caenorhabditis elegans Hypothetical
protein F14F4.3a protein.
Length = 1400
Score = 26.6 bits (56), Expect = 4.2
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -1
Query: 177 DNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAGFELPESN 52
D++H AV + +S+H +++ S S + DIV E +S+
Sbjct: 1326 DDQHSAVVVGENSEHSMEKSSQGSSQESDDIVKVENEQKDSS 1367
>AC024205-2|AAF36046.1| 308|Caenorhabditis elegans Hypothetical
protein Y73C8B.3 protein.
Length = 308
Score = 26.6 bits (56), Expect = 4.2
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 204 GFEFTSTSGDNKHGAVSLRRSSDHVLDEISVSRSVDDGDIVFAG 73
GF FT+ D KH + + S+ +LDE+ + DG + + G
Sbjct: 74 GFTFTNEYPDQKHINIERQNYSNALLDELGI-----DGKMAYIG 112
>Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical
protein C47B2.7a protein.
Length = 459
Score = 26.2 bits (55), Expect = 5.5
Identities = 11/57 (19%), Positives = 27/57 (47%)
Frame = +1
Query: 88 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTL 258
+ +ID PGH I+ ++ ++ D A+ +++ + G+ G ++ +L
Sbjct: 74 LALIDCPGHSGLIRAVLAASTVFDMAI-VISESAKKVRKGLKSMGVDENSPIVEMSL 129
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 39 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 140
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 26.2 bits (55), Expect = 5.5
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = +3
Query: 39 YHHRY-CSLEVRNRQILCHHHRRSWTQRFHQEHDH 140
Y RY L+ R IL H R+ W + H E+ H
Sbjct: 256 YIARYHIDLDPRFNDILGRHSRKRWERFIHAENQH 290
>AC024807-3|AAK84614.1| 252|Caenorhabditis elegans Hypothetical
protein Y53G8AL.3 protein.
Length = 252
Score = 25.8 bits (54), Expect = 7.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = -2
Query: 212 EIPASNSPVPAATISTAQSA*DVPVIMFLMKSLC 111
E+PA+ +PV +S+A + +V +I+F C
Sbjct: 39 EVPATTTPVSLEFVSSAHTTQNVLLIIFAASKEC 72
>AF025469-3|AAG00031.2| 271|Caenorhabditis elegans Hypothetical
protein W09B6.4 protein.
Length = 271
Score = 25.4 bits (53), Expect = 9.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +3
Query: 57 SLEVRNRQILCHHHRRSWTQRFHQEHDHWN 146
+L+ + I+CH +W + FH E WN
Sbjct: 30 ALQTDKKSIICHSAFATWYKEFHVE---WN 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,093,992
Number of Sequences: 27780
Number of extensions: 127400
Number of successful extensions: 527
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 507
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 521
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 397381406
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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