BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N12
(330 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 213 6e-58
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 213 6e-58
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 207 3e-56
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 193 4e-52
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 35 3e-04
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 1.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 2.2
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 20 6.7
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 20 6.7
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 20 6.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 20 6.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 6.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 6.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 6.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 6.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 6.7
AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex det... 20 6.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 20 6.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 20 6.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 20 6.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 20 6.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 20 6.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 20 6.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 20 6.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 20 6.7
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr... 20 6.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 20 6.7
DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization prot... 20 8.9
AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein pro... 20 8.9
AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding pr... 20 8.9
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 213 bits (519), Expect = 6e-58
Identities = 101/103 (98%), Positives = 102/103 (99%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF
Sbjct: 7 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 66
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 67 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 109
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 213 bits (519), Expect = 6e-58
Identities = 101/103 (98%), Positives = 102/103 (99%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF
Sbjct: 64 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 123
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 166
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 207 bits (505), Expect = 3e-56
Identities = 98/103 (95%), Positives = 100/103 (97%)
Frame = +1
Query: 19 KAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 198
KAERERGITIDIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEF
Sbjct: 64 KAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEF 123
Query: 199 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
EAGISKNGQTREHALLAFTLGVKQLIVGVNKMD T+PPYSE+R
Sbjct: 124 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDMTDPPYSEAR 166
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 193 bits (471), Expect = 4e-52
Identities = 91/93 (97%), Positives = 92/93 (98%)
Frame = +1
Query: 49 DIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 228
DIALWKFET KYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 229 REHALLAFTLGVKQLIVGVNKMDSTEPPYSESR 327
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE+R
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETR 93
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 34.7 bits (76), Expect = 3e-04
Identities = 26/70 (37%), Positives = 33/70 (47%)
Frame = +1
Query: 88 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 267
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 268 QLIVGVNKMD 297
+IV +NK+D
Sbjct: 247 PIIVAINKID 256
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 22.2 bits (45), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 73 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 174
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +1
Query: 73 TGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 174
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 20.2 bits (40), Expect = 6.7
Identities = 9/31 (29%), Positives = 16/31 (51%)
Frame = +3
Query: 129 EHDHWNVSS*LRRAYCRRWYW*IRSRYLKER 221
E +WN ++ LR + WY +++ K R
Sbjct: 22 EGSNWNWNTLLRPNFLDGWYQTLQTHMKKVR 52
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569705-1|AAS86658.1| 419|Apis mellifera complementary sex
determiner protein.
Length = 419
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 20.2 bits (40), Expect = 6.7
Identities = 7/27 (25%), Positives = 13/27 (48%)
Frame = +3
Query: 60 LEVRNRQILCHHHRRSWTQRFHQEHDH 140
L R ++ H R +W + +E +H
Sbjct: 27 LRSRTKEERLQHRREAWLIQQEREREH 53
>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
protein.
Length = 1308
Score = 20.2 bits (40), Expect = 6.7
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -2
Query: 299 ESILFTPTISCL-TPSVKASRACSRVCPFFEIPASNSPVPAATI 171
+S++ T + + TP+ P +PAS++ + + T+
Sbjct: 828 QSVVVTNVTTTINTPTTSVISMSGTTVPITSLPASSTSINSITV 871
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 20.2 bits (40), Expect = 6.7
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +3
Query: 90 HHHRRSWTQ 116
HH +SWTQ
Sbjct: 405 HHGSKSWTQ 413
>DQ666693-1|ABG29167.1| 250|Apis mellifera MAX dimerization protein
protein.
Length = 250
Score = 19.8 bits (39), Expect = 8.9
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +3
Query: 57 SLEVRNRQILCHHHRRSWTQRF 122
SLE R R+ H + S QRF
Sbjct: 99 SLEERERKHAVHKEQLSREQRF 120
>AF134817-1|AAD40233.1| 105|Apis mellifera FABP-like protein
protein.
Length = 105
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 195 FTSTSGDNKH 166
FTS+SGDN +
Sbjct: 48 FTSSSGDNTY 57
>AB083011-1|BAC54132.1| 135|Apis mellifera fatty acid binding
protein protein.
Length = 135
Score = 19.8 bits (39), Expect = 8.9
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 195 FTSTSGDNKH 166
FTS+SGDN +
Sbjct: 50 FTSSSGDNTY 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.317 0.134 0.387
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,612
Number of Sequences: 438
Number of extensions: 1476
Number of successful extensions: 30
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used: 7342137
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
- SilkBase 1999-2023 -