Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N10
(578 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L14429-6|AAK93870.2| 342|Caenorhabditis elegans Temporarily ass... 78 5e-15
U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical pr... 29 3.2
U97015-7|AAB52348.1| 299|Caenorhabditis elegans Defective sperm... 28 5.5
U36483-1|AAA97861.1| 299|Caenorhabditis elegans SPE-11 protein. 28 5.5
Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical pr... 27 7.3
AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal daue... 27 7.3
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 27 7.3
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 27 7.3
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 27 7.3
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 27 7.3
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 27 7.3
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 27 7.3
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 27 7.3
>L14429-6|AAK93870.2| 342|Caenorhabditis elegans Temporarily
assigned gene nameprotein 307 protein.
Length = 342
Score = 77.8 bits (183), Expect = 5e-15
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 1/107 (0%)
Frame = +3
Query: 9 ETLRAWQKKNHPWLELSDVHRETTEGVRVTVIPFYMGSRESQNSAVYWWRYCIRLENLGP 188
E + + N WL DV+RE TE + VTV+ FY+G+ + WRY IR+EN P
Sbjct: 186 ELVERYTNPNRSWLGPRDVYRERTENIEVTVMTFYLGANMVGGQQQHMWRYVIRIENKKP 245
Query: 189 Q-AVQLRERHWRIFSLSGTLETVRGRGVVGQEPVLARHAPPSSTAAT 326
+ V LRER +++SL+ + + G GVVG++P L P ++T
Sbjct: 246 ENGVILRERTLKVYSLN-NMNQMHGHGVVGKQPELNAATPAFQFSST 291
Score = 50.0 bits (114), Expect = 1e-06
Identities = 23/43 (53%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +2
Query: 305 AFQYSSHVSLQ-APSGHMWGTFRMEREDGYTFDCRIPPFSLES 430
AFQ+SS + L+ GHMWG F+MERE+G FD IP ES
Sbjct: 285 AFQFSSTLELKHTKGGHMWGRFKMERENGVLFDVHIPTIVFES 327
>U88309-4|AAB42330.1| 256|Caenorhabditis elegans Hypothetical
protein T23B3.3 protein.
Length = 256
Score = 28.7 bits (61), Expect = 3.2
Identities = 12/50 (24%), Positives = 20/50 (40%)
Frame = +3
Query: 96 TVIPFYMGSRESQNSAVYWWRYCIRLENLGPQAVQLRERHWRIFSLSGTL 245
T I + S+ + WW+ C L +AVQ H++ + L
Sbjct: 90 TAIKDMICSKRDSTKVIVWWKSCEDLLKFAEEAVQKNPNHFKALKWNAVL 139
>U97015-7|AAB52348.1| 299|Caenorhabditis elegans Defective
spermatogenesis protein11 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 114 MGSRESQNSAVYWWRYCIRLENLGPQAVQLRERHWR 221
M RE V W YC +E LG + +++ E+H++
Sbjct: 209 MDEREDDAKYVPWDEYCQEMEELGKE-LKIGEKHYK 243
>U36483-1|AAA97861.1| 299|Caenorhabditis elegans SPE-11 protein.
Length = 299
Score = 27.9 bits (59), Expect = 5.5
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +3
Query: 114 MGSRESQNSAVYWWRYCIRLENLGPQAVQLRERHWR 221
M RE V W YC +E LG + +++ E+H++
Sbjct: 209 MDEREDDAKYVPWDEYCQEMEELGKE-LKIGEKHYK 243
>Z83105-2|CAB05483.1| 434|Caenorhabditis elegans Hypothetical
protein F14H3.2 protein.
Length = 434
Score = 27.5 bits (58), Expect = 7.3
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -3
Query: 420 ENGGMRQSNVYPSSRSILNVPH 355
E GG R S+VYP R+ N PH
Sbjct: 415 EGGGFRNSDVYPKQRA--NYPH 434
>AF039717-4|AAO21385.1| 303|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform e protein.
Length = 303
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 38 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 97
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 98 PSSFRPRTQSNLSI 111
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 265 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 324
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 325 PSSFRPRTQSNLSI 338
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 243 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 302
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 303 PSSFRPRTQSNLSI 316
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 245 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 304
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 305 PSSFRPRTQSNLSI 318
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 245 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 304
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 305 PSSFRPRTQSNLSI 318
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 265 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 324
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 325 PSSFRPRTQSNLSI 338
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 243 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 302
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 303 PSSFRPRTQSNLSI 316
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 27.5 bits (58), Expect = 7.3
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 3/74 (4%)
Frame = -2
Query: 445 TLVRFTLERERRDAAI---ERVPVLTLHSKCTPHMSAWRLQTDVAAVLEGGACRASTGSC 275
T + LE+ RR A ER + +LHS + A +QT + + + + + +
Sbjct: 245 TTTKAQLEKSRRGAKKRIKERALMGSLHSTLNGNSIAGSIQTISHDLYDDDSMQGAFDNV 304
Query: 274 PTTPRPRTVSSVPL 233
P++ RPRT S++ +
Sbjct: 305 PSSFRPRTQSNLSI 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,192,636
Number of Sequences: 27780
Number of extensions: 264779
Number of successful extensions: 770
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 769
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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