Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N10
(578 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee preprosec... 24 0.94
AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein. 24 1.2
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 2.2
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 2.2
DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450 monoo... 23 2.9
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 22 5.0
DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex det... 22 5.0
DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex det... 22 5.0
DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex det... 22 5.0
DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex det... 22 5.0
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 21 8.8
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 8.8
>M12598-1|AAA27733.1| 77|Apis mellifera protein ( Bee
preprosecapin mRNA, complete cds. ).
Length = 77
Score = 24.2 bits (50), Expect = 0.94
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = -3
Query: 423 RENGGMRQSNVYPSSRSILNVPHICPLGA 337
R++ R +++ P R I++VP CP G+
Sbjct: 37 RQSLEARSADLVPEPRYIIDVPPRCPPGS 65
>AY082691-1|AAL92482.1| 77|Apis mellifera preprosecapin protein.
Length = 77
Score = 23.8 bits (49), Expect = 1.2
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -3
Query: 405 RQSNVYPSSRSILNVPHICPLGA 337
R +++ P R I++VP CP G+
Sbjct: 43 RSADLVPEPRYIIDVPPRCPPGS 65
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 244 SVPLRENILQWRSRSCTACGPKFSN 170
S LRE+++ + RS A P F+N
Sbjct: 435 SEKLREDVINYNCRSLVASVPFFAN 459
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 2.2
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 244 SVPLRENILQWRSRSCTACGPKFSN 170
S LRE+++ + RS A P F+N
Sbjct: 403 SEKLREDVINYNCRSLVASVPFFAN 427
>DQ232888-1|ABB36783.1| 499|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 499
Score = 22.6 bits (46), Expect = 2.9
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +3
Query: 225 FSLSGTLETVRGRGVVGQEPV 287
+ L+ T + + RGVVG +PV
Sbjct: 20 YYLTSTFDFWKSRGVVGPKPV 40
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 78 PKIISSLSNNTI--HNNNYKY 96
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 78 PKIISSLSNNTI--HNNNYKY 96
>DQ325087-1|ABD14101.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 79 PKIISSLSNNTI--HNNNYKY 97
>DQ325086-1|ABD14100.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 79 PKIISSLSNNTI--HNNNYKY 97
>DQ325085-1|ABD14099.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 79 PKIISSLSNNTI--HNNNYKY 97
>DQ325084-1|ABD14098.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.8 bits (44), Expect = 5.0
Identities = 8/21 (38%), Positives = 15/21 (71%)
Frame = +2
Query: 515 PTVTATTSSNTVLLHNSSYTY 577
P + ++ S+NT+ HN++Y Y
Sbjct: 79 PKIISSLSNNTI--HNNNYKY 97
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 21.0 bits (42), Expect = 8.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 89 TSYSHTVLHGQ*GITKFSSILVA 157
TS S T+LHG T +S ++A
Sbjct: 1136 TSSSETILHGLKKYTNYSMQVLA 1158
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/29 (27%), Positives = 13/29 (44%)
Frame = -1
Query: 521 QWVRTVEFVSGXXXXXXXXXXXRQEHPRP 435
+WVR +++SG + HP P
Sbjct: 554 EWVRVGKYLSGELRLNMSAIQFKLGHPEP 582
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,107
Number of Sequences: 438
Number of extensions: 3139
Number of successful extensions: 13
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16748661
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -