Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N06
(657 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071305-1|AAL48927.1| 299|Drosophila melanogaster RE33114p pro... 362 e-100
AE014134-3597|EAA46016.1| 299|Drosophila melanogaster CG17489-P... 362 e-100
AE014134-3596|EAA46019.1| 299|Drosophila melanogaster CG17489-P... 362 e-100
AE014134-3595|EAA46017.2| 320|Drosophila melanogaster CG17489-P... 360 1e-99
AE014134-3599|EAA46018.1| 178|Drosophila melanogaster CG17489-P... 319 2e-87
AE014134-3598|EAA46020.1| 178|Drosophila melanogaster CG17489-P... 319 2e-87
BT011515-1|AAS15651.1| 178|Drosophila melanogaster SD13191p pro... 314 5e-86
AF195190-1|AAF27819.1| 177|Drosophila melanogaster yippee inter... 163 1e-40
BT012458-1|AAS93729.1| 137|Drosophila melanogaster RE57391p pro... 77 3e-14
BT022616-1|AAY55032.1| 479|Drosophila melanogaster IP11966p pro... 31 1.8
BT022544-1|AAY54960.1| 540|Drosophila melanogaster IP11866p pro... 31 1.8
AE013599-2998|AAF57479.1| 520|Drosophila melanogaster CG13871-P... 31 1.8
BT024294-1|ABC86356.1| 554|Drosophila melanogaster IP12764p pro... 29 5.6
AE014297-2677|AAF55679.1| 548|Drosophila melanogaster CG7333-PA... 29 5.6
BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p pro... 29 7.3
BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p pro... 29 7.3
AE014297-154|AAF52091.1| 934|Drosophila melanogaster CG14656-PA... 29 7.3
AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-P... 29 7.3
AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-P... 29 7.3
AE013599-2010|ABI31095.1| 640|Drosophila melanogaster CG11798-P... 29 7.3
AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-P... 29 7.3
AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-P... 29 7.3
AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-P... 29 7.3
>AY071305-1|AAL48927.1| 299|Drosophila melanogaster RE33114p
protein.
Length = 299
Score = 362 bits (890), Expect = e-100
Identities = 163/200 (81%), Positives = 179/200 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSITRF 597
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+ RF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 598 PGYDAESKTFNAEVHRAHIF 657
PGY AE+K+FNA+VHRAHIF
Sbjct: 181 PGYSAETKSFNADVHRAHIF 200
>AE014134-3597|EAA46016.1| 299|Drosophila melanogaster CG17489-PB,
isoform B protein.
Length = 299
Score = 362 bits (890), Expect = e-100
Identities = 163/200 (81%), Positives = 179/200 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSITRF 597
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+ RF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 598 PGYDAESKTFNAEVHRAHIF 657
PGY AE+K+FNA+VHRAHIF
Sbjct: 181 PGYSAETKSFNADVHRAHIF 200
>AE014134-3596|EAA46019.1| 299|Drosophila melanogaster CG17489-PA,
isoform A protein.
Length = 299
Score = 362 bits (890), Expect = e-100
Identities = 163/200 (81%), Positives = 179/200 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSITRF 597
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+ RF
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRF 180
Query: 598 PGYDAESKTFNAEVHRAHIF 657
PGY AE+K+FNA+VHRAHIF
Sbjct: 181 PGYSAETKSFNADVHRAHIF 200
>AE014134-3595|EAA46017.2| 320|Drosophila melanogaster CG17489-PC,
isoform C protein.
Length = 320
Score = 360 bits (885), Expect = 1e-99
Identities = 162/199 (81%), Positives = 178/199 (89%)
Frame = +1
Query: 61 GFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVT 240
GFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+T
Sbjct: 23 GFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDIT 82
Query: 241 CQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYTG 420
Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY G
Sbjct: 83 VQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYAG 142
Query: 421 ATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSITRFP 600
TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS+ RFP
Sbjct: 143 CTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHSVKRFP 202
Query: 601 GYDAESKTFNAEVHRAHIF 657
GY AE+K+FNA+VHRAHIF
Sbjct: 203 GYSAETKSFNADVHRAHIF 221
>AE014134-3599|EAA46018.1| 178|Drosophila melanogaster CG17489-PE,
isoform E protein.
Length = 178
Score = 319 bits (784), Expect = 2e-87
Identities = 145/176 (82%), Positives = 157/176 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 585
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHS 176
>AE014134-3598|EAA46020.1| 178|Drosophila melanogaster CG17489-PD,
isoform D protein.
Length = 178
Score = 319 bits (784), Expect = 2e-87
Identities = 145/176 (82%), Positives = 157/176 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHS 585
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PHS
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPHS 176
>BT011515-1|AAS15651.1| 178|Drosophila melanogaster SD13191p
protein.
Length = 178
Score = 314 bits (772), Expect = 5e-86
Identities = 143/174 (82%), Positives = 155/174 (89%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MGFVKVVKNKQYFKRYQVKF+RRREGKTDYYARKRL QDKNKYNTPKYRLIVRLSNKD+
Sbjct: 1 MGFVKVVKNKQYFKRYQVKFRRRREGKTDYYARKRLTFQDKNKYNTPKYRLIVRLSNKDI 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
T Q+AY+RIEGD +VCAAYSHELP+YGI+VGLTNYAAAYCTG DSLY
Sbjct: 61 TVQIAYARIEGDRVVCAAYSHELPKYGIQVGLTNYAAAYCTGLLVARRVLNKLGLDSLYA 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVP 579
G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+P
Sbjct: 121 GCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIP 174
>AF195190-1|AAF27819.1| 177|Drosophila melanogaster yippee
interacting protein 6 protein.
Length = 177
Score = 163 bits (397), Expect = 1e-40
Identities = 71/85 (83%), Positives = 80/85 (94%)
Frame = +1
Query: 403 DSLYTGATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPH 582
DSLY G TEVTG+E+NVEPVD+GPGAFRC+LDVGLARTTTGARVFGAMKGAVDGGLN+PH
Sbjct: 1 DSLYAGCTEVTGEEFNVEPVDDGPGAFRCFLDVGLARTTTGARVFGAMKGAVDGGLNIPH 60
Query: 583 SITRFPGYDAESKTFNAEVHRAHIF 657
S+ FPGY AE+K+FNA+VHRAHIF
Sbjct: 61 SVXLFPGYSAETKSFNADVHRAHIF 85
>BT012458-1|AAS93729.1| 137|Drosophila melanogaster RE57391p
protein.
Length = 137
Score = 76.6 bits (180), Expect = 3e-14
Identities = 31/38 (81%), Positives = 36/38 (94%)
Frame = +1
Query: 544 MKGAVDGGLNVPHSITRFPGYDAESKTFNAEVHRAHIF 657
MKGAVDGGLN+PHS+ RFPGY AE+K+FNA+VHRAHIF
Sbjct: 1 MKGAVDGGLNIPHSVKRFPGYSAETKSFNADVHRAHIF 38
>BT022616-1|AAY55032.1| 479|Drosophila melanogaster IP11966p
protein.
Length = 479
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 575 TFKPPSTAPFMAPNTRAPVVVRAKPTSK 492
T +PP +AP P TR P R KP++K
Sbjct: 213 TPRPPPSAPSRPPTTRKPSAQRIKPSNK 240
>BT022544-1|AAY54960.1| 540|Drosophila melanogaster IP11866p
protein.
Length = 540
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 575 TFKPPSTAPFMAPNTRAPVVVRAKPTSK 492
T +PP +AP P TR P R KP++K
Sbjct: 262 TPRPPPSAPSRPPTTRKPSAQRIKPSNK 289
>AE013599-2998|AAF57479.1| 520|Drosophila melanogaster CG13871-PA
protein.
Length = 520
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = -2
Query: 575 TFKPPSTAPFMAPNTRAPVVVRAKPTSK 492
T +PP +AP P TR P R KP++K
Sbjct: 242 TPRPPPSAPSRPPTTRKPSAQRIKPSNK 269
>BT024294-1|ABC86356.1| 554|Drosophila melanogaster IP12764p
protein.
Length = 554
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = -1
Query: 435 SDFSGTCVETVQA--EPLQQSSCQQQTSAVGSSIVSQTHLDTIAWEFMRVGSTDNVITLN 262
+D +G VE +++ E + SSC V + V T+ W F R +++ T
Sbjct: 65 ADLNGLSVEGIRSVYENISASSCTPLLGVVNGTGVVSTNRKCRNWIFNRESGYESITTEL 124
Query: 261 A*VCNLTGNIFIG*P--YNQSVLWSVVFVFILD 169
VC+ + + +G + SV+ +++F ++ D
Sbjct: 125 KWVCDKSHHPAVGQSFFFMGSVVGTIIFGYLSD 157
>AE014297-2677|AAF55679.1| 548|Drosophila melanogaster CG7333-PA
protein.
Length = 548
Score = 29.1 bits (62), Expect = 5.6
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 4/93 (4%)
Frame = -1
Query: 435 SDFSGTCVETVQA--EPLQQSSCQQQTSAVGSSIVSQTHLDTIAWEFMRVGSTDNVITLN 262
+D +G VE +++ E + SSC V + V T+ W F R +++ T
Sbjct: 59 ADLNGLSVEGIRSVYENISASSCTPLLGVVNGTGVVSTNRKCRNWIFNRESGYESITTEL 118
Query: 261 A*VCNLTGNIFIG*P--YNQSVLWSVVFVFILD 169
VC+ + + +G + SV+ +++F ++ D
Sbjct: 119 KWVCDKSHHPAVGQSFFFMGSVVGTIIFGYLSD 151
>BT021440-1|AAX33588.1| 1214|Drosophila melanogaster GH07101p
protein.
Length = 1214
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
>BT009939-1|AAQ22408.1| 1108|Drosophila melanogaster SD05496p
protein.
Length = 1108
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
>AE014297-154|AAF52091.1| 934|Drosophila melanogaster CG14656-PA
protein.
Length = 934
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/54 (25%), Positives = 27/54 (50%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIVSQTHLDTIAWEFMRVGSTDNVITL 265
+G+CV + A QQ QQQ S+ +++ Q +++ +VG V+ +
Sbjct: 768 TGSCVSSAAAAQQQQHHQQQQHSSAAAAVQQQLLPPPGTYQYQQVGGNTVVVAV 821
>AE014296-2188|AAF49882.2| 271|Drosophila melanogaster CG17666-PB,
isoform B protein.
Length = 271
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 617 DSASYPGNLVIECGTFKPPST-APFMAPNTRAPVVVRAKPTSK*HLNAP 474
+S G + G+ PPST AP+ P + PT+ H ++P
Sbjct: 190 NSTRNSGGTAVSLGSCAPPSTFAPWKCPRQEVSTMPGYSPTASPHFSSP 238
>AE014296-2187|AAN11857.1| 872|Drosophila melanogaster CG17666-PA,
isoform A protein.
Length = 872
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/49 (28%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = -2
Query: 617 DSASYPGNLVIECGTFKPPST-APFMAPNTRAPVVVRAKPTSK*HLNAP 474
+S G + G+ PPST AP+ P + PT+ H ++P
Sbjct: 791 NSTRNSGGTAVSLGSCAPPSTFAPWKCPRQEVSTMPGYSPTASPHFSSP 839
>AE013599-2010|ABI31095.1| 640|Drosophila melanogaster CG11798-PD,
isoform D protein.
Length = 640
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
>AE013599-2009|AAS64853.1| 1108|Drosophila melanogaster CG11798-PB,
isoform B protein.
Length = 1108
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
>AE013599-2008|AAF58171.1| 1108|Drosophila melanogaster CG11798-PA,
isoform A protein.
Length = 1108
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
>AE013599-2007|ABI31096.1| 1214|Drosophila melanogaster CG11798-PC,
isoform C protein.
Length = 1214
Score = 28.7 bits (61), Expect = 7.3
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = -1
Query: 426 SGTCVETVQAEPLQQSSCQQQTSAVGSSIV 337
SG V T QA +QQ QQQ + G+S+V
Sbjct: 95 SGNNVATTQANVIQQQQQQQQQAESGNSVV 124
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,203,145
Number of Sequences: 53049
Number of extensions: 689756
Number of successful extensions: 1733
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1733
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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