Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N06
(657 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical pr... 283 8e-77
AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical ... 31 0.72
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 2.2
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 29 2.9
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical ... 29 2.9
Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical pr... 28 5.1
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 28 5.1
>Z49967-5|CAA90251.1| 293|Caenorhabditis elegans Hypothetical
protein F54C9.5 protein.
Length = 293
Score = 283 bits (694), Expect = 8e-77
Identities = 131/199 (65%), Positives = 153/199 (76%)
Frame = +1
Query: 58 MGFVKVVKNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDV 237
MG VKV+KNK YFKRYQVK +RRREGKTDYYARKRL VQDKNKYNTPKYRLIVR++NKDV
Sbjct: 1 MGLVKVIKNKAYFKRYQVKLRRRREGKTDYYARKRLTVQDKNKYNTPKYRLIVRITNKDV 60
Query: 238 TCQVAYSRIEGDHIVCAAYSHELPRYGIKVGLTNYAAAYCTGXXXXXXXXXXXXXDSLYT 417
Q+AYS+IEGD +V +AYSHELPRYG+KVGLTNYAAAY TG DS Y
Sbjct: 61 VAQLAYSKIEGDVVVASAYSHELPRYGLKVGLTNYAAAYATGLLLARRHLKTIGLDSTYK 120
Query: 418 GATEVTGDEYNVEPVDNGPGAFRCYLDVGLARTTTGARVFGAMKGAVDGGLNVPHSITRF 597
G E+TG++YNVE + F+ LD+GLARTTTG+++F MKG DGG+NVPHS +RF
Sbjct: 121 GHEELTGEDYNVEE-EGDRAPFKAVLDIGLARTTTGSKIFAVMKGVADGGINVPHSESRF 179
Query: 598 PGYDAESKTFNAEVHRAHI 654
G+D ESK +NAE HR I
Sbjct: 180 FGFDQESKEYNAEAHRDRI 198
>AF067610-1|AAC17538.2| 696|Caenorhabditis elegans Hypothetical
protein F41A4.1 protein.
Length = 696
Score = 31.1 bits (67), Expect = 0.72
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Frame = +1
Query: 448 NVEPVDNGPGAFRCYL-DVGLARTTTGARVFGAMKGAVDGGLNVPHSITRFPGYDAESKT 624
N EP++ G F C+L TT+G+R G + L + +FPG + +
Sbjct: 68 NAEPIEKKNGGFNCHLHSKSPVLTTSGSRTVGTKTCLENKCLKRSFAFEKFPGRSLVNSS 127
Query: 625 F 627
F
Sbjct: 128 F 128
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/84 (28%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = -2
Query: 638 TSALNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAPVVVRAKPTSK*HLNAPGPLST 459
TS V+ S+S + + T P ST + P + PT+ P +T
Sbjct: 461 TSTPLVVSSSSSGSSSTVVTSTITP-STQGVPTSTSNQPTPSTSNPTTPKSTVTASPSTT 519
Query: 458 GSTLYSSP--VTSVAPV*RLSKPS 393
G+T +SP +TS AP + PS
Sbjct: 520 GATSTASPSTITSSAPTSQSHSPS 543
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 266 RVITLSVL----PTLMNSHAMVSRWV*LTMLLPTALVCC 370
RV+ ++L P+L N+ A VSRW + LP + CC
Sbjct: 77 RVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCC 115
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +2
Query: 266 RVITLSVL----PTLMNSHAMVSRWV*LTMLLPTALVCC 370
RV+ ++L P+L N+ A VSRW + LP + CC
Sbjct: 77 RVVVQNILHGLSPSLSNALASVSRWKLVRAALPHVIQCC 115
>AL132951-9|CAC44304.3| 553|Caenorhabditis elegans Hypothetical
protein Y67H2A.2a protein.
Length = 553
Score = 29.1 bits (62), Expect = 2.9
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +1
Query: 37 ISGIF*KMGFVKVVKNKQYFKRYQVKFKRRREGKTDYY 150
I IF K+G V+ K +Q +R+Q+KF RE +T Y+
Sbjct: 405 IYSIFYKLGKVEE-KERQIIERFQIKF-HEREDRTRYF 440
>Z92806-5|CAB07255.2| 1251|Caenorhabditis elegans Hypothetical
protein K10G4.5 protein.
Length = 1251
Score = 28.3 bits (60), Expect = 5.1
Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +1
Query: 187 YNTPKYRLIVRLSNKDVTCQVAYSRIEGDHI---VCAAYSHEL 306
YN P+YR +++L K C+ + GD++ +CA + EL
Sbjct: 548 YNDPEYRNVMKLKIKSPICE--QCEVTGDNLPFGICAEHETEL 588
>Z81138-5|CAB63320.3| 1278|Caenorhabditis elegans Hypothetical protein
W05B2.2 protein.
Length = 1278
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/57 (31%), Positives = 25/57 (43%), Gaps = 1/57 (1%)
Frame = -3
Query: 304 VHESRQHRQCDHPQCVSMQLDR*HLYWITVQSVGTLECCICFYPGQRGV-CEHSSQF 137
VH S +H QC HP LD + +++S E C+ G V C+H F
Sbjct: 1084 VHSSIEHLQCPHPYL--NPLDHPQMCITSLKSCSDSETCLKTTSGGNFVCCQHPPSF 1138
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 28.3 bits (60), Expect = 5.1
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 550 GAVDGGLNVPHSITRFPGYDAESKTFNAEVHRA 648
G V G N+ + + GYD TFN+E+ A
Sbjct: 269 GTVFGEANMSRKLVQQEGYDLSHPTFNSEIRAA 301
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,906,339
Number of Sequences: 27780
Number of extensions: 346201
Number of successful extensions: 915
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 914
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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