Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N06
(657 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 26 0.28
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 26 0.28
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 25 0.64
AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase pro... 24 1.1
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 24 1.5
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex det... 23 1.9
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 23 1.9
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 23 1.9
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 23 1.9
AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex det... 23 1.9
AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex det... 23 1.9
AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex det... 23 1.9
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 23 2.6
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 23 2.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 2.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.6
DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein. 23 2.6
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 23 2.6
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 23 2.6
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 3.4
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.4
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 23 3.4
AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone este... 22 4.5
AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein. 22 4.5
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 22 5.9
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 5.9
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 7.8
AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex det... 21 7.8
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 79 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 204
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 273 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 314
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 26.2 bits (55), Expect = 0.28
Identities = 11/42 (26%), Positives = 20/42 (47%)
Frame = +1
Query: 79 KNKQYFKRYQVKFKRRREGKTDYYARKRLVVQDKNKYNTPKY 204
KN++ +++Y+ K R +T+ K + N YN Y
Sbjct: 284 KNEREYRKYRETSKGRSRDRTERERSKETKIISSNNYNYKNY 325
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 25.0 bits (52), Expect = 0.64
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P S P+++ + P
Sbjct: 355 INYIEQIPVPVPVPIYCGNFPPRSMEPWISMQEQIP 390
>AY526236-1|AAS20469.1| 85|Apis mellifera epoxide hydrolase
protein.
Length = 85
Score = 24.2 bits (50), Expect = 1.1
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = -3
Query: 262 CVSMQLDR*HLYWITVQSVGTLECCICFYPGQRGVCEHSSQFFP 131
C S+ L +L+W+ V GT ++P G EH S+FFP
Sbjct: 29 CTSLNLS--NLFWLFV---GT------YFPSLIGANEHYSKFFP 61
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISVQEQVP 146
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325115-1|ABD14129.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 116 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 150
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 112 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQVP 146
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 111 INYIEQVPVPIPVPIYCGNFPPRPMGPWISMQEQIP 146
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 121 INYIEQIPVPVPVPIYCGNFPPRPMGPWISMQEQIP 156
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 330 INYIEQIPIPVPVPIYCGNFPPRPMGPWISMQEQIP 365
>AY569703-1|AAS86656.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 326 INYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 361
>AY569701-1|AAS86654.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 337 INYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 372
>AY569700-1|AAS86653.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 337 INYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 372
>AY569699-1|AAS86652.1| 396|Apis mellifera complementary sex
determiner protein.
Length = 396
Score = 23.4 bits (48), Expect = 1.9
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 326 INYIEQIPVPVPIPIYCGNFPPRPMGPWISIQEQIP 361
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 115 INYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIP 150
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 115 INYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIP 150
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 115 INYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIP 150
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 115 INYIEQIPIPVPVPIYCGNFPPRPLGPWISIQEQIP 150
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 110 INYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 145
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 110 INYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 145
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 113 INYIEQIPIPVPVPIYCGNFPPRPMGPWISIQEQIP 148
>DQ257416-1|ABB81847.1| 552|Apis mellifera yellow-h protein.
Length = 552
Score = 23.0 bits (47), Expect = 2.6
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +1
Query: 139 TDYYARKRLVVQDKNKYNTPKYRLIVRLSNKDVTCQVAY 255
TD RK ++ +++ K ++ ++V + N+D +AY
Sbjct: 288 TDTLIRKYIIPKEQVKEDSLYTNIVVDIRNEDCGSAIAY 326
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + I CG F P P+++ + P
Sbjct: 337 NIINIEQIPVPVPIYCGNFPPRPMGPWISIQEQIP 371
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 23.0 bits (47), Expect = 2.6
Identities = 9/36 (25%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + I CG F P P+++ + P
Sbjct: 348 INYIEQIPVPVPVPIYCGNFPPRPMGPWISIQEQIP 383
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 3.4
Identities = 11/39 (28%), Positives = 18/39 (46%)
Frame = -2
Query: 221 NRTISRYFGVLYLFLSWTTRRLRA**SVFPSRRLLNLTW 105
N Y ++L SW RLR ++ R+L++ W
Sbjct: 45 NEESMTYVADIFLAQSWRDSRLRLPENMSEDYRILDVDW 83
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/36 (22%), Positives = 17/36 (47%)
Frame = -2
Query: 629 LNVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
+N ++ P + + CG F P P+++ + P
Sbjct: 112 INYIEQIPVPVPVPVYCGNFPPRPMGPWISIQEQIP 147
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 22.6 bits (46), Expect = 3.4
Identities = 8/35 (22%), Positives = 17/35 (48%)
Frame = -2
Query: 626 NVLDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
N+++ P + + CG F P P+++ + P
Sbjct: 339 NIINIEQIPVPVPVYCGNFPPRPMGPWISIQEQIP 373
>AY647436-1|AAU81605.1| 567|Apis mellifera juvenile hormone
esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 636 FGIKCLRFSIISREPRDRM 580
FG CL+++ + PRD++
Sbjct: 81 FGFPCLQYTQLPVNPRDKI 99
>AB083009-1|BAC54130.1| 567|Apis mellifera esterase protein.
Length = 567
Score = 22.2 bits (45), Expect = 4.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 636 FGIKCLRFSIISREPRDRM 580
FG CL+++ + PRD++
Sbjct: 81 FGFPCLQYTQLPVNPRDKI 99
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = -3
Query: 571 LNLHQRRPSWHQI 533
LN+H R+PS H++
Sbjct: 320 LNVHYRKPSTHKM 332
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 5.9
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = -3
Query: 187 ICFYPGQRGVCEHSSQFFPH 128
+C +PG +CE F H
Sbjct: 282 VCKWPGCEVICEDYQAFLKH 301
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 305 CLLRMSRPGKKITKKTILG 323
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 373 CLLRMSRPGKKITKKTILG 391
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.4 bits (43), Expect = 7.8
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 348 CLLHWSVAGKKIVAEARLG 404
CLL S GKKI + LG
Sbjct: 373 CLLRMSRPGKKITKKTILG 391
>AY569720-1|AAS86673.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 7.8
Identities = 8/33 (24%), Positives = 15/33 (45%)
Frame = -2
Query: 620 LDSASYPGNLVIECGTFKPPSTAPFMAPNTRAP 522
++ P + I CG F P P+++ + P
Sbjct: 339 IEQIPVPVPVPIHCGNFPPRPMGPWISIQEQVP 371
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,230
Number of Sequences: 438
Number of extensions: 4241
Number of successful extensions: 54
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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