Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N04
(561 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical pr... 107 4e-24
Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical pr... 66 1e-11
Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical pr... 66 1e-11
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr... 45 3e-05
Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical pr... 30 1.3
M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger pro... 30 1.3
Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical pr... 29 2.3
AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein. 29 2.3
AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical ... 28 5.3
Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical pr... 27 9.2
U13643-6|AAL56620.1| 180|Caenorhabditis elegans Hypothetical pr... 27 9.2
L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical pr... 27 9.2
>U40948-5|AAA81731.2| 955|Caenorhabditis elegans Hypothetical protein
F55D10.1 protein.
Length = 955
Score = 107 bits (258), Expect = 4e-24
Identities = 55/145 (37%), Positives = 90/145 (62%), Gaps = 4/145 (2%)
Frame = +2
Query: 125 NISEINWFVRIL---IDDGVGKDVVLTYKTDILNNGQFYTDSNGRQILKRVLNKRPQWNV 295
N E W V + + + K+ V Y T++ + Q +TDSNGRQ ++R + +
Sbjct: 673 NYIEFEWIVGPIPKETKNPITKEFVTRYTTEVHSKNQSFTDSNGRQAMERFFDGATSFEY 732
Query: 296 TLEEPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVEGEIQLMVHRRLLHDDAFGV 475
+ EP+AGNYYP+ + YI++++ +F+V+TDRA G + +G +++M+HRR +DD FGV
Sbjct: 733 SDTEPIAGNYYPITSFGYIKDENAQFSVITDRAQGMVA-SDGVVEIMLHRRCFYDDHFGV 791
Query: 476 GEALNETVL-GQPLVAIGTHVIIQT 547
EAL+E G LVA+G H+++ T
Sbjct: 792 EEALDEPGKDGAGLVAMGKHIVLFT 816
>Z75954-6|CAJ55257.1| 1145|Caenorhabditis elegans Hypothetical protein
F58H1.1b protein.
Length = 1145
Score = 66.5 bits (155), Expect = 1e-11
Identities = 38/145 (26%), Positives = 77/145 (53%)
Frame = +2
Query: 59 IRRTVTNVGDELSIIRTDYLSSNISEINWFVRILIDDGVGKDVVLTYKTDILNNGQFYTD 238
+++ ++L I++T L + I+ + + ++ L + + + + +F+TD
Sbjct: 840 VQKVFATPNNDLKILQTYTLYQGLPWIDLDNEVDVRSKENFELALRFSSSVNSGDEFFTD 899
Query: 239 SNGRQILKRVLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVE 418
NG Q++KR R Q + P N+YP+ +YIE+D R ++ + +A G +SL
Sbjct: 900 LNGMQMIKR----RRQTKL----PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSS 951
Query: 419 GEIQLMVHRRLLHDDAFGVGEALNE 493
G+I++M+ RRL DD G+ + + +
Sbjct: 952 GQIEIMLDRRLSSDDNRGLQQGVRD 976
>Z75954-5|CAB00104.1| 1143|Caenorhabditis elegans Hypothetical protein
F58H1.1a protein.
Length = 1143
Score = 66.5 bits (155), Expect = 1e-11
Identities = 38/145 (26%), Positives = 77/145 (53%)
Frame = +2
Query: 59 IRRTVTNVGDELSIIRTDYLSSNISEINWFVRILIDDGVGKDVVLTYKTDILNNGQFYTD 238
+++ ++L I++T L + I+ + + ++ L + + + + +F+TD
Sbjct: 838 VQKVFATPNNDLKILQTYTLYQGLPWIDLDNEVDVRSKENFELALRFSSSVNSGDEFFTD 897
Query: 239 SNGRQILKRVLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGASLVE 418
NG Q++KR R Q + P N+YP+ +YIE+D R ++ + +A G +SL
Sbjct: 898 LNGMQMIKR----RRQTKL----PTQANFYPMSAGVYIEDDTTRMSIHSAQALGVSSLSS 949
Query: 419 GEIQLMVHRRLLHDDAFGVGEALNE 493
G+I++M+ RRL DD G+ + + +
Sbjct: 950 GQIEIMLDRRLSSDDNRGLQQGVRD 974
>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical protein
F48C1.1 protein.
Length = 1064
Score = 45.2 bits (102), Expect = 3e-05
Identities = 26/83 (31%), Positives = 42/83 (50%)
Frame = +2
Query: 230 YTDSNGRQILKRVLNKRPQWNVTLEEPVAGNYYPVVNEIYIENDDQRFTVLTDRAAGGAS 409
YTDS G Q+L+R K P V NYYP+ +++ QR +++++ G
Sbjct: 822 YTDSVGMQLLRRDFYKLP---------VQSNYYPMPTAAVLQSGKQRLSIVSNVEHGARF 872
Query: 410 LVEGEIQLMVHRRLLHDDAFGVG 478
L G +++ + R L DD G+G
Sbjct: 873 LESGTVEINIDRILNQDDGKGLG 895
>Z81039-2|CAB02774.1| 2150|Caenorhabditis elegans Hypothetical
protein C25D7.3 protein.
Length = 2150
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 14 PYRSQARVKRIENGNIRRTVTNVGD-ELSIIRTDYLSSN--ISEINWFVRILIDDGVGKD 184
P R+Q +V+R R + + D + S L N + ++N+ R+ +D + KD
Sbjct: 668 PRRNQPKVQRSLVTYTRFRLAELEDKDFSFPEEKMLEKNRLLEKLNFEERLQLDALMSKD 727
Query: 185 VVLTYKTDILNNGQFYTDSNGRQILKRVLNKRPQWN 292
V YK ++ F + + ILKR+ K +W+
Sbjct: 728 V--KYKPRMIPEKGFLQLQDEKLILKRLCEKEDEWS 761
>M85149-1|AAA28144.1| 2150|Caenorhabditis elegans zinc finger
protein protein.
Length = 2150
Score = 29.9 bits (64), Expect = 1.3
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Frame = +2
Query: 14 PYRSQARVKRIENGNIRRTVTNVGD-ELSIIRTDYLSSN--ISEINWFVRILIDDGVGKD 184
P R+Q +V+R R + + D + S L N + ++N+ R+ +D + KD
Sbjct: 668 PRRNQPKVQRSLVTYTRFRLAELEDKDFSFPEEKMLEKNRLLEKLNFEERLQLDALMSKD 727
Query: 185 VVLTYKTDILNNGQFYTDSNGRQILKRVLNKRPQWN 292
V YK ++ F + + ILKR+ K +W+
Sbjct: 728 V--KYKPRMIPEKGFLQLQDEKLILKRLCEKEDEWS 761
>Z82089-5|CAD91717.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4351 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4409
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4410 LTPLGQKASSSTS 4422
>Z82089-4|CAB54513.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4458 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4516
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4517 LTPLGQKASSSTS 4529
>Z82089-3|CAB05004.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 444 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 502
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 503 LTPLGQKASSSTS 515
>Z82089-2|CAB05003.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4340 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4398
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4399 LTPLGQKASSSTS 4411
>Z81499-7|CAD91628.1| 4541|Caenorhabditis elegans Hypothetical protein
ZK270.2e protein.
Length = 4541
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4351 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4409
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4410 LTPLGQKASSSTS 4422
>Z81499-6|CAB54224.2| 4648|Caenorhabditis elegans Hypothetical protein
ZK270.2d protein.
Length = 4648
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4458 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4516
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4517 LTPLGQKASSSTS 4529
>Z81499-5|CAB04091.2| 634|Caenorhabditis elegans Hypothetical
protein ZK270.2b protein.
Length = 634
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 444 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 502
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 503 LTPLGQKASSSTS 515
>Z81499-4|CAB04090.2| 4530|Caenorhabditis elegans Hypothetical protein
ZK270.2a protein.
Length = 4530
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 203 TDILNNGQFYTDSNGRQILKRVLNKRPQWNVTLEE----PVAGNYYPVVNEIYIENDDQR 370
+D+ + YTD NGRQI + V + + + V + V G+ P V + +E ++
Sbjct: 4340 SDLPEQVEVYTDENGRQITRTVKSSQVKHTVQTQSFQNYIVDGDQVP-VGVVDVERSREQ 4398
Query: 371 FTVLTDRAAGGAS 409
T L +A+ S
Sbjct: 4399 LTPLGQKASSSTS 4411
>Z82075-3|CAB04929.2| 784|Caenorhabditis elegans Hypothetical
protein W07A8.3 protein.
Length = 784
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 501 STVSFNASPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVN 370
S+ S ++ +P SSWSN LL S + P T PP R+ + N
Sbjct: 544 SSASNLSTASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASN 589
>AF293972-1|AAG02478.1| 784|Caenorhabditis elegans auxilin protein.
Length = 784
Score = 29.1 bits (62), Expect = 2.3
Identities = 17/46 (36%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 501 STVSFNASPTPNASSWSN--LLCTISWISPSTKDAPPAARSVNTVN 370
S+ S ++ +P SSWSN LL S + P T PP R+ + N
Sbjct: 544 SSASNLSTASPATSSWSNTDLLGGFSPMKPQTTSTPPNTRNPSASN 589
>AF024502-2|AAK77623.1| 591|Caenorhabditis elegans Hypothetical
protein M151.4 protein.
Length = 591
Score = 27.9 bits (59), Expect = 5.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 89 ELSIIRTDYLSSNISEINWFVRILIDDGVGKDVVLTYKTDILN 217
E+S+ + L + I+E+ VR+L DDG K+ +LN
Sbjct: 83 EISMTENNALEAEINELKQKVRMLTDDGQNKEKQTKELEGVLN 125
>Z70310-5|CAA94369.1| 1141|Caenorhabditis elegans Hypothetical
protein R11A8.6 protein.
Length = 1141
Score = 27.1 bits (57), Expect = 9.2
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +2
Query: 242 NGRQILKRVLNKRPQWNVTLEEPVAGNYYPVVNEIYIEND 361
+GR +LKRV W + P A N+YP N E++
Sbjct: 513 SGRGVLKRVSEVFDCWFESGSMPYAQNHYPFENRKIFEDN 552
>U13643-6|AAL56620.1| 180|Caenorhabditis elegans Hypothetical
protein T07E3.6b protein.
Length = 180
Score = 27.1 bits (57), Expect = 9.2
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 183 SLPTPSSIKILTNQFISLMFELK*SVLIIDSSSPTLVTVRRIF 55
+LP PSS+ + N+FI M L + ++SP L +++
Sbjct: 84 ALPLPSSLNVNMNRFIISMIALLAVFCAVSTASPLLYRAPQMY 126
>L17337-4|ABM74561.1| 217|Caenorhabditis elegans Hypothetical
protein ZK686.4 protein.
Length = 217
Score = 27.1 bits (57), Expect = 9.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 152 RILIDDGVGKDVVLTYKTDILNNGQFYTD 238
++ +D VGK VV+T T G FY D
Sbjct: 65 KVDLDSKVGKSVVITKATPSAETGGFYCD 93
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,381,450
Number of Sequences: 27780
Number of extensions: 261382
Number of successful extensions: 684
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1155524042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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