Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_N01
(440 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 65 3e-11
03_05_0169 + 21474655-21474771,21474879-21474971,21475553-214756... 48 4e-06
04_04_0919 - 29422003-29422267,29422411-29422660,29423163-294234... 45 2e-05
10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,117... 40 7e-04
07_03_0471 + 18501496-18502104,18503009-18503260,18503367-185035... 40 7e-04
04_04_0915 - 29385926-29385952,29386069-29386285,29386367-293866... 40 9e-04
02_05_0444 - 29073740-29073844,29074417-29074725,29077910-290779... 39 0.002
06_02_0092 - 11624905-11625123,11625206-11625292,11625767-116258... 39 0.002
04_03_0946 + 20975955-20976095,20976189-20976330,20976449-209765... 39 0.002
03_04_0201 - 18409088-18409306,18409389-18409475,18409950-184100... 39 0.002
04_04_1035 + 30283456-30283536,30284823-30285359,30285508-302865... 38 0.004
09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,230... 38 0.005
04_04_0918 - 29411239-29411373,29412276-29412526,29412772-294130... 36 0.011
04_04_0959 + 29692740-29693035,29693102-29693267,29693433-296936... 35 0.025
02_05_0329 - 27986261-27987372,27988632-27988638,27988999-279891... 35 0.025
03_03_0186 + 15243150-15243563,15243685-15243777,15244604-152446... 34 0.044
10_08_0765 - 20421813-20423174,20423591-20423771,20423862-204241... 34 0.058
11_06_0557 - 24955837-24956214,24957225-24957395,24957576-249576... 29 2.2
11_01_0356 + 2690910-2691248 27 5.1
05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 27 8.8
>03_01_0417 -
3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 64.9 bits (151), Expect = 3e-11
Identities = 31/54 (57%), Positives = 39/54 (72%)
Frame = -3
Query: 432 DIGIITPYIAQVKYLRVLFDAMGLPLPKIGSVEEFQGQERPIIIISTVRTTEAH 271
DIG+ITPY QV ++ + +P K+GSVE+FQGQER IIIISTVR+T H
Sbjct: 706 DIGVITPYRQQVVKIKKALETFEMPDLKVGSVEQFQGQEREIIIISTVRSTVKH 759
Score = 47.6 bits (108), Expect = 4e-06
Identities = 19/55 (34%), Positives = 32/55 (58%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINNAVMEDKYVGCDLP 80
LGF+ N +R NVA+TRA+ ++ + +P ++ D W +++ Y GC LP
Sbjct: 768 LGFLSNHRRFNVAITRAKSLLIIIGNPHIITKDRHWDRLLRYCADNGSYQGCPLP 822
>03_05_0169 +
21474655-21474771,21474879-21474971,21475553-21475642,
21475728-21475811,21476088-21476252,21476995-21477182,
21477363-21477435,21477766-21477819,21478019-21478276,
21478891-21479097,21479293-21479396,21479809-21479953,
21480108-21480242,21480610-21480783
Length = 628
Score = 47.6 bits (108), Expect = 4e-06
Identities = 29/77 (37%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Frame = -3
Query: 435 NDIGIITPYIAQVKYLRVLFDA-MGLPLPKIGSVEEFQGQERPIIIISTVRTT---EAHL 268
+DIGIITPY AQV L+++ + L +I +V+ FQG+E+ IIIS VR+ E
Sbjct: 515 SDIGIITPYAAQVTCLKMMRNKDTKLKDLEISTVDGFQGREKEAIIISMVRSNSKKEVGF 574
Query: 267 SEDHKKTL*ALSKTQKE 217
DH++ A+++ +++
Sbjct: 575 LSDHRRMNVAVTRARRQ 591
Score = 37.5 bits (83), Expect = 0.005
Identities = 16/43 (37%), Positives = 27/43 (62%)
Frame = -2
Query: 253 KNTLGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVI 125
K +GF+ + +RMNVA+TRA+ L CD + + D K+++
Sbjct: 569 KKEVGFLSDHRRMNVAVTRARRQCCLVCDVETVSNDKFLKRLV 611
>04_04_0919 -
29422003-29422267,29422411-29422660,29423163-29423481,
29423625-29424794,29424879-29425388,29425449-29425607
Length = 890
Score = 45.2 bits (102), Expect = 2e-05
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 2/51 (3%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRVLFDAMGL-PLP-KIGSVEEFQGQERPIIIISTVRT 283
+GII PY AQV+ ++ DA + PL ++ SV+ FQG E III+STVR+
Sbjct: 730 VGIICPYAAQVEAIQSGIDANAVRPLDVRVNSVDGFQGSEEDIIILSTVRS 780
Score = 35.5 bits (78), Expect = 0.019
Identities = 17/46 (36%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Frame = -2
Query: 247 TLGFVKNSKRMNVALTRAQVVVFLFCD-PDLLCTDPLWKKVINNAV 113
++GF+ N +R NVALTRA+ +++ D LL + +W +++ +AV
Sbjct: 785 SIGFLSNRRRANVALTRARHCLWILGDAATLLGSGSVWGELVRDAV 830
>10_01_0097 - 1171949-1172047,1172520-1172591,1172791-1172949,
1172998-1173381,1173478-1175253,1175329-1175452,
1176859-1177027,1177131-1177226,1177339-1177527,
1177965-1179303
Length = 1468
Score = 40.3 bits (90), Expect = 7e-04
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRVLFD-AMGLPLPK---IGSVEEFQGQERPIIIISTVRTT 280
+GIITPY Q+K L+ F+ M K I +V+ FQGQER +II+S VR +
Sbjct: 1153 VGIITPYKLQLKCLQREFEEVMSTEDGKDIYINTVDAFQGQERDVIIMSCVRAS 1206
Score = 33.9 bits (74), Expect = 0.058
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINNAVMEDKYVGCD-LPYDIL 68
+GFV + +RMNVALTRA+ +++ + L W +I +A ++ D +P D L
Sbjct: 1210 VGFVADIRRMNVALTRARRALWVVGNAGALMQSEDWALLIADAKARKCFMDLDTIPKDFL 1269
>07_03_0471 + 18501496-18502104,18503009-18503260,18503367-18503537,
18503693-18503743,18503868-18503960,18504125-18504220,
18504318-18504368,18504452-18504570,18504909-18505017,
18505391-18505513,18505590-18505661,18505963-18506034,
18506125-18506191,18506260-18506402,18506494-18506565,
18506632-18506760,18507317-18507472,18507579-18507692,
18507791-18507889,18507974-18508051,18508402-18508536,
18509081-18509155,18509247-18509361,18509458-18509828,
18509903-18509965,18510049-18510120,18510285-18510413,
18510512-18510628,18510902-18511018
Length = 1289
Score = 40.3 bits (90), Expect = 7e-04
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINN 119
+GF+ + +R+NVALTRA+ + + +P +L PLW ++ +
Sbjct: 894 IGFLNDPRRLNVALTRARYGIVILGNPKVLSKQPLWNSLLTH 935
Score = 35.1 bits (77), Expect = 0.025
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
Frame = -3
Query: 435 NDIGIITPYIAQVKYLRVLFDAMG---LPLPK---IGSVEEFQGQERPIIIISTVRTTE 277
+ IG+ITPY Q Y+ G L K + SV+ FQG+E+ II+S VR+ E
Sbjct: 832 SQIGVITPYEGQRAYIVNYMSRNGSLRQQLYKEIEVASVDSFQGREKDYIILSCVRSNE 890
>04_04_0915 -
29385926-29385952,29386069-29386285,29386367-29386622,
29386745-29387072,29387157-29387587,29388014-29388163,
29388212-29388398,29388709-29388750,29389007-29389555,
29389778-29390032
Length = 813
Score = 39.9 bits (89), Expect = 9e-04
Identities = 22/56 (39%), Positives = 34/56 (60%), Gaps = 4/56 (7%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRV----LFDAMGLPLPKIGSVEEFQGQERPIIIISTVRTTEA 274
+G+++PY AQV+ ++ +D K+ SV+ FQG E +IIISTVR+ A
Sbjct: 658 VGVVSPYNAQVRAIQEKIGKTYDMYDDFSVKVKSVDGFQGAEEDVIIISTVRSNRA 713
Score = 34.3 bits (75), Expect = 0.044
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = -2
Query: 247 TLGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTD-PLWKKVINNAVMEDKYVGC 89
++GF+ N +R N+ALTRA+ +++ + L +W+KV+N+A K+ GC
Sbjct: 715 SVGFLTNLQRTNMALTRAKHCLWIVGNGTTLSNSRSVWQKVVNDA----KHRGC 764
>02_05_0444 -
29073740-29073844,29074417-29074725,29077910-29077981,
29078541-29078633,29078825-29078982,29079247-29079415,
29080204-29081241,29081632-29081759,29081926-29081985,
29082033-29083077
Length = 1058
Score = 39.1 bits (87), Expect = 0.002
Identities = 20/50 (40%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRV-LFDAMGLPLPKIGSVEEFQGQERPIIIISTVRT 283
I + +PYIAQV+ LR L + GL ++ +++ FQG+E ++IS VR+
Sbjct: 820 IAVQSPYIAQVQLLRERLEEYPGLSGVEVSTIDSFQGREADAVVISMVRS 869
Score = 27.9 bits (59), Expect = 3.8
Identities = 11/17 (64%), Positives = 16/17 (94%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRA 194
+GF+ +S+RMNVA+TRA
Sbjct: 875 VGFLGDSRRMNVAITRA 891
>06_02_0092 -
11624905-11625123,11625206-11625292,11625767-11625889,
11625992-11626351,11626427-11626511,11626603-11626661,
11627173-11627265,11627360-11627464,11627539-11627636,
11627811-11627916,11628009-11628131,11628986-11629021,
11629113-11629310,11629415-11629612,11629917-11630056,
11630181-11630322,11630416-11630556
Length = 770
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINNAVMEDKYVGCDLPY 77
+GFV + +RMNVA+TRA+ V + L D W ++ +A +Y P+
Sbjct: 648 IGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPF 703
>04_03_0946 +
20975955-20976095,20976189-20976330,20976449-20976588,
20976893-20977090,20977195-20977392,20977484-20977519,
20978374-20978496,20978589-20978694,20978869-20978966,
20979041-20979145,20979240-20979332,20979842-20979900,
20979984-20980068,20980144-20980503,20980606-20980728,
20981203-20981289,20981372-20981590
Length = 770
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINNAVMEDKYVGCDLPY 77
+GFV + +RMNVA+TRA+ V + L D W ++ +A +Y P+
Sbjct: 648 IGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPF 703
>03_04_0201 -
18409088-18409306,18409389-18409475,18409950-18410072,
18410175-18410534,18410610-18410694,18410780-18410838,
18411350-18411442,18411537-18411641,18411716-18411813,
18411988-18412093,18412186-18412308,18413163-18413198,
18413290-18413487,18413592-18413789,18414094-18414233,
18414356-18414497,18414591-18414731
Length = 770
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINNAVMEDKYVGCDLPY 77
+GFV + +RMNVA+TRA+ V + L D W ++ +A +Y P+
Sbjct: 648 IGFVSDFRRMNVAITRARSAVLVVGSASTLKEDKHWNNLVESAKERGRYFQVPKPF 703
>04_04_1035 +
30283456-30283536,30284823-30285359,30285508-30286512,
30286718-30287042,30287563-30287818,30287901-30288117,
30288743-30289095,30289330-30289833,30291267-30292467,
30292614-30292970,30293258-30293495,30294083-30295125,
30295234-30296649,30296731-30296855,30297036-30297314,
30297352-30297382,30298957-30299022,30299447-30299689,
30299848-30299898,30299980-30300071,30300182-30300249,
30300515-30300600,30300720-30300824,30300994-30301127,
30302403-30302436,30302620-30302892,30303019-30303288,
30303384-30303974,30304065-30304214
Length = 3376
Score = 37.9 bits (84), Expect = 0.004
Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Frame = -3
Query: 429 IGIITPYIAQV----KYLRVLFDAMGLPLPKIGSVEEFQGQERPIIIISTVRT 283
IG+I+PY +QV L L+D ++ SV+ FQG+E III+STVR+
Sbjct: 660 IGVISPYSSQVDSIESRLGKLYDTCDGFHVRVKSVDGFQGEEDDIIILSTVRS 712
Score = 31.5 bits (68), Expect = 0.31
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = -2
Query: 253 KNTLGFVKNSKRMNVALTRAQVVVFLFCDPD-LLCTDPLWKKVINNA 116
K +GF+ + +R NVALTRA+ +++ + + L + +WK +I +A
Sbjct: 715 KGIVGFLADEQRTNVALTRARHCLWILGNANTLYSSGTVWKDLIADA 761
>09_01_0155 - 2301903-2302151,2302334-2302491,2302651-2302819,
2303796-2304839,2305792-2306075,2306318-2307333,
2307937-2308085
Length = 1022
Score = 37.5 bits (83), Expect = 0.005
Identities = 15/42 (35%), Positives = 28/42 (66%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCDPDLLCTDPLWKKVINN 119
+GF+ +++RMNVA+TRA+ V L CD +C + +++ +
Sbjct: 949 VGFLGDNRRMNVAITRARRHVALVCDSSTICNNAFLARLLRH 990
Score = 35.1 bits (77), Expect = 0.025
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = -3
Query: 429 IGIITPYIAQVKYLR-VLFDAMGLPLPKIGSVEEFQGQERPIIIISTVRT 283
I + +PYIAQV+ LR L D ++ +++ FQG+E ++IS VR+
Sbjct: 894 IAVQSPYIAQVQLLRDRLEDYPEASGVEVSTIDSFQGREADAVVISMVRS 943
>04_04_0918 -
29411239-29411373,29412276-29412526,29412772-29413009,
29413133-29414251,29414540-29415106
Length = 769
Score = 36.3 bits (80), Expect = 0.011
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRVLFDAMGLP--LPKIGSVEEFQGQERPIIIISTVRT 283
+G+I PY AQV ++ M + KI S + FQG E II +STVR+
Sbjct: 652 VGVICPYTAQVLAIQQKLGKMKFDPVIVKINSGDGFQGGEEDIITLSTVRS 702
>04_04_0959 + 29692740-29693035,29693102-29693267,29693433-29693612,
29693703-29693771,29693888-29694088,29694187-29694240,
29694325-29694386,29694488-29694620,29694789-29694899,
29695008-29695104,29695638-29695714,29696129-29696194,
29696431-29696583,29697392-29697447,29697524-29697584,
29697656-29697766,29698010-29698144,29698217-29698447,
29699001-29699075,29699161-29699282,29699381-29699453,
29699538-29699642,29699728-29699895,29700079-29700148,
29700224-29700375,29700574-29700651,29700744-29700836,
29700961-29701098,29701237-29701276,29701350-29701423,
29701777-29701911,29702345-29702464,29702778-29702939
Length = 1287
Score = 35.1 bits (77), Expect = 0.025
Identities = 17/49 (34%), Positives = 32/49 (65%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRVLFDAMGLPLPKIGSVEEFQGQERPIIIISTVRT 283
+GIITPY AQ ++ DA ++ +++++QG+++ II+S VR+
Sbjct: 1164 VGIITPYNAQANLIQQHVDAS----VEVHTIDKYQGRDKECIIVSFVRS 1208
>02_05_0329 -
27986261-27987372,27988632-27988638,27988999-27989128,
27989157-27989216,27989318-27989970,27990056-27990526
Length = 810
Score = 35.1 bits (77), Expect = 0.025
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Frame = -3
Query: 429 IGIITPYIAQVKYLRV----LFDAMGLPLPKIGSVEEFQGQERPIIIISTVRT 283
+G+++PY QV+ ++ ++ G K+ SV+ FQG E III S VR+
Sbjct: 300 VGVVSPYKGQVRAIQERLGKAYETHGGFTVKVRSVDGFQGAEEDIIIFSAVRS 352
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = -2
Query: 247 TLGFVKNSKRMNVALTRAQVVVFLFCDPDLLCT 149
++GF+ N R NVALTRA+ +++ + + L +
Sbjct: 357 SVGFLSNVNRTNVALTRAKHCLWILGNANTLAS 389
>03_03_0186 + 15243150-15243563,15243685-15243777,15244604-15244666,
15245028-15245114,15245197-15245349,15245422-15245579,
15246458-15246692,15246782-15246892,15246942-15246968,
15247269-15248327,15248432-15248692,15249011-15249196,
15249642-15250793,15250886-15251236,15251343-15251738
Length = 1581
Score = 34.3 bits (75), Expect = 0.044
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = -3
Query: 435 NDIGIITPYIAQVKYLRVLFDAMGLPL-----PKIGSVEEFQGQERPIIIISTVRTTEAH 271
N I I+T Y Q +R + + P K+ +V++FQGQ+ I++S VRT
Sbjct: 1300 NKISILTTYNGQKLLIRDVINRRCKPWNIEPPSKVTTVDKFQGQQNDFILLSLVRTRFVG 1359
Query: 270 LSEDHKKTL*ALSKTQ 223
D ++ + A+S+ +
Sbjct: 1360 HLRDVRRLIVAMSRAR 1375
>10_08_0765 -
20421813-20423174,20423591-20423771,20423862-20424117,
20424768-20425095,20425218-20426156,20427015-20427761,
20428517-20428789
Length = 1361
Score = 33.9 bits (74), Expect = 0.058
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Frame = -3
Query: 429 IGIITPYIAQV----KYLRVLFDAMGLPLPKIGSVEEFQGQERPIIIISTVRTTE 277
+G+I+PY AQV + L F + S++ FQG E II+ISTVR+ +
Sbjct: 773 LGVISPYTAQVIALQERLGKQFKNHEFLSVTVKSIDGFQGGEEDIILISTVRSNK 827
Score = 31.9 bits (69), Expect = 0.23
Identities = 13/44 (29%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Frame = -2
Query: 244 LGFVKNSKRMNVALTRAQVVVFLFCD-PDLLCTDPLWKKVINNA 116
+GF+ ++ R+NVALTRA+ +++ + LL ++ +W ++++++
Sbjct: 831 VGFLSDAGRINVALTRAKYCLWILGNGATLLASNSIWAELVHDS 874
>11_06_0557 - 24955837-24956214,24957225-24957395,24957576-24957635,
24958419-24958623,24958710-24958953,24959103-24959394,
24959734-24960828,24960915-24961409,24961665-24961823,
24961893-24962387
Length = 1197
Score = 28.7 bits (61), Expect = 2.2
Identities = 14/46 (30%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Frame = -2
Query: 220 RMNVALTRAQVVVFLFCDPDLLCTDP-LWKKVINNAVMEDKYVGCD 86
R+NVALT+++ +++ D+L P WK +I++++ ++ V D
Sbjct: 918 RINVALTKSRHCLWIIGQADILLQIPGTWKSLIHHSMQQNCVVVLD 963
>11_01_0356 + 2690910-2691248
Length = 112
Score = 27.5 bits (58), Expect = 5.1
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -3
Query: 360 PLPKIGSVEEFQGQERPIIIISTVRTTEA 274
P+PKIG+ E Q +++ STV T A
Sbjct: 48 PIPKIGAAETVAPQADIVVVASTVATGSA 76
>05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,
2879715-2879973,2880060-2880346,2880423-2880758,
2880862-2881003,2881077-2881297,2881379-2881540,
2881617-2881775,2881860-2882159,2882834-2883097,
2883133-2883243,2883902-2883988
Length = 1871
Score = 26.6 bits (56), Expect = 8.8
Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +2
Query: 323 PWNSSTDPIFGKGSPIASNSTLKYL-TCAMYGVIIPI 430
P S+T PI+ SPI S ++L Y T +Y P+
Sbjct: 1646 PIYSATSPIYSPSSPIYSPTSLSYSPTSPVYSPTSPV 1682
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,842,371
Number of Sequences: 37544
Number of extensions: 166705
Number of successful extensions: 393
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 367
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 835800280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -