Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_N01
         (440 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    25   0.49 
DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    22   2.6  
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    22   2.6  
AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase prec...    22   2.6  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   4.5  
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          21   6.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    21   6.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   7.9  

>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 24.6 bits (51), Expect = 0.49
 Identities = 10/30 (33%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +3

Query: 45  LMIYIYSFKISYGRSHPTY-LSSITALLIT 131
           +++Y +S    YG  H TY + ++T +L+T
Sbjct: 241 MIVYEFSISRHYGILHATYVIPAVTMMLLT 270


>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 186 WSFYFVIQTFCVQTRYGKRLLTML*WKIN 100
           W +Y++  T   +  YG   LT+  W  N
Sbjct: 172 WDYYYIYHTLVAEQSYG---LTLPSWTNN 197


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 186 WSFYFVIQTFCVQTRYGKRLLTML*WKIN 100
           W +Y++  T   +  YG   LT+  W  N
Sbjct: 187 WDYYYIYHTLVAEQSYG---LTLPSWTNN 212


>AF205594-1|AAQ13840.1|  156|Apis mellifera acid phosphatase
           precursor protein.
          Length = 156

 Score = 22.2 bits (45), Expect = 2.6
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 186 WSFYFVIQTFCVQTRYGKRLLTML*WKIN 100
           W +Y++  T   +  YG   LT+  W  N
Sbjct: 75  WDYYYIYHTLVAEQSYG---LTLPSWTNN 100


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 4.5
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 141  NGSVHKRSGSQN 176
            N S H RSGSQ+
Sbjct: 1768 NASAHSRSGSQS 1779


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 400 LCNVWCDYTDIIY 438
           L +VW DY  I+Y
Sbjct: 67  LLSVWWDYKGIVY 79


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.0 bits (42), Expect = 6.0
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 400 LCNVWCDYTDIIY 438
           L +VW DY  I+Y
Sbjct: 189 LLSVWWDYKGIVY 201


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 7.9
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 370 SIKQYP*IFNLCNVWC 417
           S ++YP I +L NV C
Sbjct: 699 STREYPRIMDLDNVMC 714


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,917
Number of Sequences: 438
Number of extensions: 2029
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11450997
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)