Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M19
         (375 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC053620-1|AAH53620.1|  576|Homo sapiens DOCK9 protein protein.        28   8.6  
AL161420-6|CAI39575.1|  424|Homo sapiens RP11-155N3.2 protein.         28   8.6  
AL161420-4|CAI39572.1|  668|Homo sapiens RP11-155N3.2 protein.         28   8.6  
AL161420-1|CAI39569.1| 2068|Homo sapiens RP11-155N3.2 protein.         28   8.6  
AL139084-2|CAI13370.1| 2068|Homo sapiens RP11-155N3.2 protein.         28   8.6  
AF527605-1|AAM90306.1| 2069|Homo sapiens zizimin1 protein.             28   8.6  
AB028981-1|BAA83010.2| 2095|Homo sapiens KIAA1058 protein protein.     28   8.6  

>BC053620-1|AAH53620.1|  576|Homo sapiens DOCK9 protein protein.
          Length = 576

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169 RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
           R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 25  RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 65


>AL161420-6|CAI39575.1|  424|Homo sapiens RP11-155N3.2 protein.
          Length = 424

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169 RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
           R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 162 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 202


>AL161420-4|CAI39572.1|  668|Homo sapiens RP11-155N3.2 protein.
          Length = 668

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169 RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
           R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 105 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 145


>AL161420-1|CAI39569.1| 2068|Homo sapiens RP11-155N3.2 protein.
          Length = 2068

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169  RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
            R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 1518 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 1558


>AL139084-2|CAI13370.1| 2068|Homo sapiens RP11-155N3.2 protein.
          Length = 2068

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169  RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
            R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 1518 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 1558


>AF527605-1|AAM90306.1| 2069|Homo sapiens zizimin1 protein.
          Length = 2069

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169  RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
            R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 1519 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 1559


>AB028981-1|BAA83010.2| 2095|Homo sapiens KIAA1058 protein protein.
          Length = 2095

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 11/41 (26%), Positives = 25/41 (60%)
 Frame = +1

Query: 169  RNAMKINMAVDESVCNYKRVPSNRYQCFINDISNCSNIDRL 291
            R  +++ ++V + + +   +   R+Q  ++ I+NC+N DRL
Sbjct: 1545 RTHLQVIISVSQLIADVVGIGGTRFQQSLSIINNCANSDRL 1585


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 38,177,201
Number of Sequences: 237096
Number of extensions: 525594
Number of successful extensions: 628
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 628
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2479134298
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)