Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M18
(366 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36529-1|AAA53571.1| 657|Homo sapiens protein p84 protein. 53 3e-07
BC010381-1|AAH10381.1| 657|Homo sapiens THO complex 1 protein. 53 3e-07
AY573303-1|AAT81409.1| 377|Homo sapiens death domain-containing... 53 3e-07
AY573302-1|AAT81408.1| 86|Homo sapiens death domain-containing... 32 0.49
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 31 1.5
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 31 1.5
BC022876-1|AAH22876.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 3.5
BC022364-1|AAH22364.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 3.5
BC011444-1|AAH11444.1| 166|Homo sapiens cofilin 2 (muscle) prot... 29 3.5
AF283513-1|AAF97934.1| 166|Homo sapiens muscle cofilin protein. 29 3.5
AF242299-1|AAF64498.1| 166|Homo sapiens cofilin 2b protein. 29 3.5
AF134803-1|AAD31281.1| 166|Homo sapiens cofilin isoform 2 protein. 29 3.5
AF134802-1|AAD31280.1| 166|Homo sapiens cofilin isoform 1 protein. 29 3.5
AF087867-1|AAM10495.1| 166|Homo sapiens cofilin isoform protein. 29 3.5
>L36529-1|AAA53571.1| 657|Homo sapiens protein p84 protein.
Length = 657
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 80 ELRSKYKDVLSKAFENNNID-LLDSFTK-NANESDRKAAMDQAFRDKLLELLAEESRI-- 247
E R+++ +A N NI LL +F++ +E+++K +DQAFR L E + S
Sbjct: 12 EARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILEEEIINHSSCEN 71
Query: 248 LEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
+ +S I + T + P VLLGD+ D L L++C+
Sbjct: 72 VLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCD 110
>BC010381-1|AAH10381.1| 657|Homo sapiens THO complex 1 protein.
Length = 657
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 80 ELRSKYKDVLSKAFENNNID-LLDSFTK-NANESDRKAAMDQAFRDKLLELLAEESRI-- 247
E R+++ +A N NI LL +F++ +E+++K +DQAFR L E + S
Sbjct: 12 EARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILEEEIINHSSCEN 71
Query: 248 LEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
+ +S I + T + P VLLGD+ D L L++C+
Sbjct: 72 VLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCD 110
>AY573303-1|AAT81409.1| 377|Homo sapiens death domain-containing
protein p84N5 short isoform protein.
Length = 377
Score = 52.8 bits (121), Expect = 3e-07
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 4/99 (4%)
Frame = +2
Query: 80 ELRSKYKDVLSKAFENNNID-LLDSFTK-NANESDRKAAMDQAFRDKLLELLAEESRI-- 247
E R+++ +A N NI LL +F++ +E+++K +DQAFR L E + S
Sbjct: 12 EARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILEEEIINHSSCEN 71
Query: 248 LEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
+ +S I + T + P VLLGD+ D L L++C+
Sbjct: 72 VLAIISLAIGGVTEGICTASTPFVLLGDVLDCLPLDQCD 110
>AY573302-1|AAT81408.1| 86|Homo sapiens death domain-containing
protein p84N5 short isoform 2 protein.
Length = 86
Score = 32.3 bits (70), Expect = 0.49
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Frame = +2
Query: 80 ELRSKYKDVLSKAFENNNID-LLDSFTK-NANESDRKAAMDQAFRDKLLELLAEES 241
E R+++ +A N NI LL +F++ +E+++K +DQAFR L E + S
Sbjct: 12 EARTRFTKSTREALNNKNIKPLLSTFSQVPGSENEKKCTLDQAFRGILEEEIINHS 67
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +2
Query: 26 DLKRDIKNFTMSDKLGFDELRSKY-KDVLSKAFENNNID-LLDSFTKNA-NESDRKAAMD 196
+L+R +K+ + +L F + + Y K++ KA E +N++ L++ F KNA N S A+
Sbjct: 685 ELER-LKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNNSSAFTALS 743
Query: 197 QAFRDKLLELLAEESRILE 253
+ RD+LL + E S + E
Sbjct: 744 EE-RDQLLSQVKELSMVTE 761
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372
protein.
Length = 3225
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = +2
Query: 26 DLKRDIKNFTMSDKLGFDELRSKY-KDVLSKAFENNNID-LLDSFTKNA-NESDRKAAMD 196
+L+R +K+ + +L F + + Y K++ KA E +N++ L++ F KNA N S A+
Sbjct: 651 ELER-LKSQILELELNFHKAQEIYEKNLDEKAKEISNLNQLIEEFKKNADNNSSAFTALS 709
Query: 197 QAFRDKLLELLAEESRILE 253
+ RD+LL + E S + E
Sbjct: 710 EE-RDQLLSQVKELSMVTE 727
>BC022876-1|AAH22876.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>BC022364-1|AAH22364.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>BC011444-1|AAH11444.1| 166|Homo sapiens cofilin 2 (muscle)
protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>AF283513-1|AAF97934.1| 166|Homo sapiens muscle cofilin protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>AF242299-1|AAF64498.1| 166|Homo sapiens cofilin 2b protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>AF134803-1|AAD31281.1| 166|Homo sapiens cofilin isoform 2 protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>AF134802-1|AAD31280.1| 166|Homo sapiens cofilin isoform 1 protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
>AF087867-1|AAM10495.1| 166|Homo sapiens cofilin isoform protein.
Length = 166
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +2
Query: 233 EESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDAL 346
EE + +K V FC+ +RQ++ +L+GDI D +
Sbjct: 27 EEIKKRKKAVLFCLSDDKRQIIVEEAKQILVGDIGDTV 64
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,794,062
Number of Sequences: 237096
Number of extensions: 835256
Number of successful extensions: 1597
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1594
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2306171440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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