Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M18
         (366 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122188-1|AAM52700.1|  701|Drosophila melanogaster LD43883p pro...    61   4e-10
AJ556821-1|CAD89220.1|  701|Drosophila melanogaster Hpr1 protein...    61   4e-10
AE014297-367|AAF51946.1|  701|Drosophila melanogaster CG2031-PA ...    61   4e-10
BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p pro...    29   1.4  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   1.4  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   1.4  
BT023917-1|ABB36421.1|  323|Drosophila melanogaster SD26182p pro...    29   1.9  
AF074334-1|AAC26868.1|  324|Drosophila melanogaster cyclin H hom...    29   1.9  
AF024618-1|AAB82275.1|  325|Drosophila melanogaster cyclin H pro...    29   1.9  
AE014296-3622|AAF51784.1|  324|Drosophila melanogaster CG7405-PA...    29   1.9  

>AY122188-1|AAM52700.1|  701|Drosophila melanogaster LD43883p
           protein.
          Length = 701

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +2

Query: 53  TMSDKLG-FDELRSKYKDVLSKAFENNNIDLL----DSFTKNANESDRKAAMDQAFRDKL 217
           T  +KL  +  L+S ++  L  A  +  ++LL    + F  N  E D++  MD AFR  L
Sbjct: 10  TAPEKLANYFALQSAFEKALELAITDGKVELLVKEYNRFPANT-EHDKRLPMDHAFRVLL 68

Query: 218 LELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
           ++ L E+   + + V   +++ R ++V+ T+PVVLL D FD +TL+KC+
Sbjct: 69  MKRLDEDVSRIGELVRLSVEATRAEIVSNTIPVVLLIDTFDVVTLDKCQ 117


>AJ556821-1|CAD89220.1|  701|Drosophila melanogaster Hpr1 protein
           protein.
          Length = 701

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +2

Query: 53  TMSDKLG-FDELRSKYKDVLSKAFENNNIDLL----DSFTKNANESDRKAAMDQAFRDKL 217
           T  +KL  +  L+S ++  L  A  +  ++LL    + F  N  E D++  MD AFR  L
Sbjct: 10  TAPEKLANYFALQSAFEKALELAITDGKVELLVKEYNRFPANT-EHDKRLPMDHAFRVLL 68

Query: 218 LELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
           ++ L E+   + + V   +++ R ++V+ T+PVVLL D FD +TL+KC+
Sbjct: 69  MKRLDEDVSRIGELVRLSVEATRAEIVSNTIPVVLLIDTFDVVTLDKCQ 117


>AE014297-367|AAF51946.1|  701|Drosophila melanogaster CG2031-PA
           protein.
          Length = 701

 Score = 61.3 bits (142), Expect = 4e-10
 Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 5/109 (4%)
 Frame = +2

Query: 53  TMSDKLG-FDELRSKYKDVLSKAFENNNIDLL----DSFTKNANESDRKAAMDQAFRDKL 217
           T  +KL  +  L+S ++  L  A  +  ++LL    + F  N  E D++  MD AFR  L
Sbjct: 10  TAPEKLANYFALQSAFEKALELAITDGKVELLVKEYNRFPANT-EHDKRLPMDHAFRVLL 68

Query: 218 LELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIFDALTLNKCE 364
           ++ L E+   + + V   +++ R ++V+ T+PVVLL D FD +TL+KC+
Sbjct: 69  MKRLDEDVSRIGELVRLSVEATRAEIVSNTIPVVLLIDTFDVVTLDKCQ 117


>BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p
           protein.
          Length = 888

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 360 HLFNVSASKMSPSKTTGIVGVTICRLQESMQNETNFSRILDSSAN-NSRSLSLKA 199
           H   VS S++S    TG+  + +  L+ S+ +E + + ILD + N +S+SL   A
Sbjct: 395 HKQAVSNSEISKDAPTGLKEMHVAELESSVASENHPAGILDVNVNKSSQSLDFSA 449


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
           initiation factoreIF4G protein.
          Length = 1666

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 360 HLFNVSASKMSPSKTTGIVGVTICRLQESMQNETNFSRILDSSAN-NSRSLSLKA 199
           H   VS S++S    TG+  + +  L+ S+ +E + + ILD + N +S+SL   A
Sbjct: 395 HKQAVSNSEISKDAPTGLKEMHVAELESSVASENHPAGILDVNVNKSSQSLDFSA 449


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
           protein.
          Length = 1345

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
 Frame = -1

Query: 360 HLFNVSASKMSPSKTTGIVGVTICRLQESMQNETNFSRILDSSAN-NSRSLSLKA 199
           H   VS S++S    TG+  + +  L+ S+ +E + + ILD + N +S+SL   A
Sbjct: 74  HKQAVSNSEISKDAPTGLKEMHVAELESSVASENHPAGILDVNVNKSSQSLDFSA 128


>BT023917-1|ABB36421.1|  323|Drosophila melanogaster SD26182p
           protein.
          Length = 323

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 170 ESDRKAAMDQAFRDKLLELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIF 337
           ES  + A  +   +  L   AEE  +L+++  +  D CRR    PTMP  ++G  F
Sbjct: 31  ESHEEEAQGRDLNEHFLTS-AEERLLLKQYEIYLFDFCRR--FEPTMPKCVVGTAF 83


>AF074334-1|AAC26868.1|  324|Drosophila melanogaster cyclin H
           homolog protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 170 ESDRKAAMDQAFRDKLLELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIF 337
           ES  + A  +   +  L   AEE  +L+++  +  D CRR    PTMP  ++G  F
Sbjct: 32  ESHEEEAQGRDLNEHFLTS-AEERLLLKQYEIYLFDFCRR--FEPTMPKCVVGTAF 84


>AF024618-1|AAB82275.1|  325|Drosophila melanogaster cyclin H
           protein.
          Length = 325

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 170 ESDRKAAMDQAFRDKLLELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIF 337
           ES  + A  +   +  L   AEE  +L+++  +  D CRR    PTMP  ++G  F
Sbjct: 33  ESHEEEAQGRDLNEHFLTS-AEERLLLKQYEIYLFDFCRR--FEPTMPKCVVGTAF 85


>AE014296-3622|AAF51784.1|  324|Drosophila melanogaster CG7405-PA
           protein.
          Length = 324

 Score = 29.1 bits (62), Expect = 1.9
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = +2

Query: 170 ESDRKAAMDQAFRDKLLELLAEESRILEKFVSFCIDSCRRQMVTPTMPVVLLGDIF 337
           ES  + A  +   +  L   AEE  +L+++  +  D CRR    PTMP  ++G  F
Sbjct: 32  ESHEEEAQGRDLNEHFLTS-AEERLLLKQYEIYLFDFCRR--FEPTMPKCVVGTAF 84


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,298,647
Number of Sequences: 53049
Number of extensions: 261475
Number of successful extensions: 866
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 848
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 866
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 943048980
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)