Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0006_M18
(366 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 27 4.1
AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical ... 27 4.1
Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical pr... 26 7.2
U97015-5|AAB52344.2| 362|Caenorhabditis elegans Hypothetical pr... 26 7.2
AL110479-19|CAB54366.1| 222|Caenorhabditis elegans Hypothetical... 26 7.2
Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical p... 26 9.5
Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical pr... 26 9.5
U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical pr... 26 9.5
AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical ... 26 9.5
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.1 bits (57), Expect = 4.1
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = +2
Query: 86 RSKYKDVLSKAFENNNIDLLDSFTKN-ANE-SDRKAAMDQAFRDKLLELLAEESRILEK 256
+S YKD++ K FE+ + + KN NE D+K ++++ +K EL E R LEK
Sbjct: 334 KSNYKDIIIKLFESRT----ERWMKNRINELCDKKISINRELINKKNELRTAEER-LEK 387
>AF002197-2|AAB53983.2| 486|Caenorhabditis elegans Hypothetical
protein F20H11.1 protein.
Length = 486
Score = 27.1 bits (57), Expect = 4.1
Identities = 19/74 (25%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 80 ELRSKYKDVLSKAFENNNIDLLDSFTKNANESDRKAAMDQAFRDKLLELLAEESRILEKF 259
E ++K +++S + D+L + N + +KAA Q + DK+++L E + ++
Sbjct: 87 ETKTKPINIVSNTEFPEDRDVLGNLV-NCLDRQQKAARQQMYFDKIVQLGLERQALQDEA 145
Query: 260 V---SFCIDSCRRQ 292
V S +D CR +
Sbjct: 146 VVSTSSPLDECRAE 159
>Z35719-6|CAA84795.1| 1253|Caenorhabditis elegans Hypothetical
protein F17C8.1 protein.
Length = 1253
Score = 26.2 bits (55), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +3
Query: 147 IHSQKMLMNLTGKQQWIKLSGINSSNYWP 233
+HSQK T KQ+W + +N +N +P
Sbjct: 522 LHSQKSSKKSTLKQKWAEKLKMNHTNSYP 550
>U97015-5|AAB52344.2| 362|Caenorhabditis elegans Hypothetical
protein F48C1.2 protein.
Length = 362
Score = 26.2 bits (55), Expect = 7.2
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Frame = -1
Query: 258 NFSRILDSSANNSRSLSLKA*SIAAFRSDSLAFFVNE---SSKSILL 127
++S++L A NS+SLS+++ S + FFVN+ +SKSI L
Sbjct: 135 DWSKVLQD-ALNSKSLSIRSFSGVLLKFQEAFFFVNKLNYTSKSIYL 180
>AL110479-19|CAB54366.1| 222|Caenorhabditis elegans Hypothetical
protein Y105C5B.20 protein.
Length = 222
Score = 26.2 bits (55), Expect = 7.2
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 86 RSKYKDVLS--KAFENNNIDLLDSFTKNANESDRKAAMDQAFRDKLLEL 226
R+ Y+D+ K+ N N L D +N +SD+ +DQ + L EL
Sbjct: 168 RNNYEDIFDVLKSNLNKNEQLNDIDGRNNQKSDKMTEVDQTDKMHLTEL 216
>Z81017-13|CAB02674.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 38 DIKNFTMSDKLGFDELRSKYKDVLSKAFENNNIDLLDSFTKNANESDRKAAMDQAFRDK 214
D+K+ + +L ++ K L +N N D +D F + +E+D K + + +D+
Sbjct: 395 DVKSINLDKRLSVFSVKKAPK--LRALKDNRNFDKIDIFDEGISENDAKNEVALSQKDE 451
>Z68005-5|CAA91993.2| 526|Caenorhabditis elegans Hypothetical
protein F59F3.4 protein.
Length = 526
Score = 25.8 bits (54), Expect = 9.5
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 38 DIKNFTMSDKLGFDELRSKYKDVLSKAFENNNIDLLDSFTKNANESDRKAAMDQAFRDK 214
D+K+ + +L ++ K L +N N D +D F + +E+D K + + +D+
Sbjct: 395 DVKSINLDKRLSVFSVKKAPK--LRALKDNRNFDKIDIFDEGISENDAKNEVALSQKDE 451
>U64853-3|AAB04976.1| 565|Caenorhabditis elegans Hypothetical
protein K11G9.1 protein.
Length = 565
Score = 25.8 bits (54), Expect = 9.5
Identities = 18/67 (26%), Positives = 33/67 (49%)
Frame = +2
Query: 2 HEDLV**IDLKRDIKNFTMSDKLGFDELRSKYKDVLSKAFENNNIDLLDSFTKNANESDR 181
+E L+ D K++T +L +E YK+ + E ++ + +TKN +E D
Sbjct: 346 NEGLLFAFDRNTPYKDYTDLLRLKIEE---DYKEDVVDDVEGIRKEIFEYYTKNISEGDE 402
Query: 182 KAAMDQA 202
+A M +A
Sbjct: 403 EAIMRKA 409
>AF024492-3|AAF98619.1| 918|Caenorhabditis elegans Hypothetical
protein F14F9.4 protein.
Length = 918
Score = 25.8 bits (54), Expect = 9.5
Identities = 17/77 (22%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +2
Query: 32 KRDIKNFTMSDKLGFDELRSKYKDVLSKAFENNNIDLLDSFTKNANESDRKAAM-DQAFR 208
K D++N+ ++ FDE + +++ + N++DL +N + RK+ D
Sbjct: 259 KIDLENYDSYEE-DFDEEYEQSNELVPQRPSENSVDLSTFVVENREKQSRKSKRNDNEMS 317
Query: 209 DKLLELLAEESRILEKF 259
+++E L E+ F
Sbjct: 318 YEIVESLKPETEYCNLF 334
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,660,166
Number of Sequences: 27780
Number of extensions: 144183
Number of successful extensions: 424
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 423
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 514188384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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