Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0006_M18
         (366 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   0.65 
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   2.0  
L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          21   3.4  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.0  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   8.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 0.65
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = +2

Query: 101 DVLSKAFENNNIDLLDSFTKNAN 169
           D+L + FE N + LL+SF +  N
Sbjct: 286 DILEE-FERNRLQLLESFKRKVN 307


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.2 bits (45), Expect = 2.0
 Identities = 8/25 (32%), Positives = 13/25 (52%), Gaps = 2/25 (8%)
 Frame = +3

Query: 174 LTGKQQWIKLSGINSSNYW--PRNP 242
           +TG ++W+  + I     W  PR P
Sbjct: 150 ITGDEKWVVYNNIKRKRSWSRPREP 174


>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.4 bits (43), Expect = 3.4
 Identities = 6/21 (28%), Positives = 11/21 (52%)
 Frame = +3

Query: 174 LTGKQQWIKLSGINSSNYWPR 236
           +TG ++W+  + I     W R
Sbjct: 29  ITGDEKWVVYNNIKRKRSWSR 49


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 20.6 bits (41), Expect = 6.0
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = -1

Query: 348 VSASKMSPSKTTGIVGVTICRLQESMQNE 262
           V+ S  + + TTG   +   RL++  QN+
Sbjct: 245 VATSNATAAMTTGTTTIPTRRLRKRRQND 273


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 8.0
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = -3

Query: 316  YWHRRSYHLPSTG 278
            +W R  Y +PS G
Sbjct: 1196 FWERLRYAIPSAG 1208


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,805
Number of Sequences: 438
Number of extensions: 1875
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  8680350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)